RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ADAM33Q9BZ11 813 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 AZI2Q9H6S1 392 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.57■□□□□ 0.242e-7■■□□□ 13.9
PTBP1-201ENST00000349038 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 hCG_2014768A0A024R1R8 64 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 GRIK3Q13003 919 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 NPY5RQ15761 445 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 TATDN2Q93075 761 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 P2RX5Q93086 422 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 LRRC45Q96CN5 670 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 HOOK2Q96ED9 719 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 NDST4Q9H3R1 872 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-201ENST00000349038 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
PTBP1-201ENST00000349038 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
PTBP1-201ENST00000349038 CCDC194A0A1B0GVG4 234 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 IRS4O14654 1257 aaPredicted RBP16.56■□□□□ 0.24
PTBP1-201ENST00000349038 PRPF3O43395 683 aaKnown RBP16.56■□□□□ 0.24
PTBP1-201ENST00000349038 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 WHAMMQ8TF30 809 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
PTBP1-201ENST00000349038 MGRN1O60291 552 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 LETM2Q2VYF4 491 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 FGFR1OP2Q9NVK5 253 aa16.56■□□□□ 0.24
PTBP1-201ENST00000349038 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 SPDYE3A6NKU9 549 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 KRT16P08779 473 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 SSR1P43307 286 aaKnown RBP16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ZNF211Q13398 564 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-201ENST00000349038 XRCC4Q13426 336 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 NUGGCQ68CJ6 796 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ZNF662Q6ZS27 426 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 TRPM8Q7Z2W7 1104 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 DNAJC10Q8IXB1 793 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 GDF3Q9NR23 364 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 SLC12A6Q9UHW9 1150 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MYH3P11055 1940 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MYH6P13533 1939 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 KIF3CO14782 793 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 CNGA1P29973 690 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MEA1Q16626 185 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ANKRD20A2Q5SQ80 823 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ANKRD20A1Q5TYW2 823 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 GLIS3Q8NEA6 775 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 MRRFQ96E11 262 aaKnown RBP16.55■□□□□ 0.24
PTBP1-201ENST00000349038 SNX24Q9Y343 169 aa16.55■□□□□ 0.24
PTBP1-201ENST00000349038 RGS16O15492 202 aaPredicted RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 DRD4P21917 467 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 TECP42680 631 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 TTI2Q6NXR4 508 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 DISC1Q9NRI5 854 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 COL22A1Q8NFW1 1626 aaPredicted RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 PLCG1P19174 1290 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 ABCB4P21439 1286 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 KLHL30Q0D2K2 578 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 UBAP2Q5T6F2 1119 aaKnown RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 ZNF449Q6P9G9 518 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 GLG1Q92896 1179 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 PAPOLBQ9NRJ5 636 aaKnown RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 TBK1Q9UHD2 729 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 PLCH1Q4KWH8 1693 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 A0A087X0T9 212 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 DPPA5A6NC42 116 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 MAP3K13O43283 966 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 PDE8AO60658 829 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 FAM228BP0C875 321 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 NEFHP12036 1026 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 SLC5A1P13866 664 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 RWDD2BP57060 319 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 STAG2Q8N3U4 1231 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 PYM1Q9BRP8 204 aaKnown RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
PTBP1-201ENST00000349038 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
PTBP1-201ENST00000349038 TRAF5O00463 557 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
PTBP1-201ENST00000349038 ATP11AP98196 1134 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 DRP2Q13474 957 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 TMEM110-MUSTN1A8MSY1 372 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 FGFR4P22455 802 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 RFX8Q6ZV50 586 aa16.53■□□□□ 0.24
PTBP1-201ENST00000349038 TNIP1Q15025 636 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms