RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 OR8K1Q8NGG5 319 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 BRCA1P38398 1863 aaKnown RBP23.57■■□□□ 1.36
PTPN18-202ENST00000347849 MED24O75448 989 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 RPS6KA5O75582 802 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 ATP1A1P05023 1023 aaKnown RBP23.57■■□□□ 1.36
PTPN18-202ENST00000347849 IDEP14735 1019 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 USP14P54578 494 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 UBXN2AP68543 259 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 LRRC31Q6UY01 552 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 MICALL2Q8IY33 904 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 CAPZA3Q96KX2 299 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 SEMA6BQ9H3T3 888 aa23.57■■□□□ 1.36
PTPN18-202ENST00000347849 INPP5BP32019 993 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 TNIP1Q15025 636 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 P2RX5Q93086 422 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 GDAP1L1Q96MZ0 367 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 ZNF341Q9BYN7 854 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 RANBP17Q9H2T7 1088 aaKnown RBP23.56■■□□□ 1.36
PTPN18-202ENST00000347849 HAUS4Q9H6D7 363 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 LUC7L2Q9Y383 392 aaKnown RBP23.56■■□□□ 1.36
PTPN18-202ENST00000347849 RNF40O75150 1001 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 STIM1Q13586 685 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 CCDC122Q5T0U0 273 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 UNC13DQ70J99 1090 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 DHTKD1Q96HY7 919 aaPredicted RBP23.56■■□□□ 1.36
PTPN18-202ENST00000347849 SAR1BQ9Y6B6 198 aa23.56■■□□□ 1.36
PTPN18-202ENST00000347849 SYF2O95926 243 aaKnown RBP23.55■■□□□ 1.36
PTPN18-202ENST00000347849 SSBP05455 408 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTPN18-202ENST00000347849 CACNB1Q02641 598 aaPredicted RBP23.55■■□□□ 1.36
PTPN18-202ENST00000347849 LRRC41Q15345 812 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 CSGALNACT2Q8N6G5 542 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 NLGN2Q8NFZ4 835 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 DNAJC19Q96DA6 116 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 NPHP3-ACAD11A0A0J9YXS1 232 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 MSH4O15457 936 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 ZMYND10O75800 440 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 CCNE1P24864 410 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 GOLGA6L1Q8N7Z2 621 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 MB21D1Q8N884 522 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 PLEKHA4Q9H4M7 779 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 FZD1Q9UP38 647 aa23.55■■□□□ 1.36
PTPN18-202ENST00000347849 POTEFA5A3E0 1075 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 ASNSP08243 561 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 POTEIP0CG38 1075 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 TSR1Q2NL82 804 aaKnown RBP23.54■■□□□ 1.36
PTPN18-202ENST00000347849 Q4G0T1 1027 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 POTEGQ6S5H5 508 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 POTEEQ6S8J3 1075 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 NAP1L4Q99733 375 aaKnown RBP23.54■■□□□ 1.36
PTPN18-202ENST00000347849 FGFBP2Q9BYJ0 223 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 PIK3CDO00329 1044 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 FOSP01100 380 aaPredicted RBP23.54■■□□□ 1.36
PTPN18-202ENST00000347849 PSMC6P62333 389 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 HERVK_113P62684 666 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 HYIQ5T013 277 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 PRAMEF18Q5VWM3 479 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 CNNM4Q6P4Q7 775 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 MOXD1Q6UVY6 613 aa23.54■■□□□ 1.36
PTPN18-202ENST00000347849 CNOT7Q9UIV1 285 aaKnown RBP23.54■■□□□ 1.36
PTPN18-202ENST00000347849 MEIS1O00470 390 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 WDR59Q6PJI9 974 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 CCDC47Q96A33 483 aaKnown RBP23.53■■□□□ 1.36
PTPN18-202ENST00000347849 HACL1Q9UJ83 578 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 ANKRD65E5RJM6 399 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 EHHADHQ08426 723 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 CATSPER3Q86XQ3 398 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 RIN2Q8WYP3 895 aaPredicted RBP23.53■■□□□ 1.36
PTPN18-202ENST00000347849 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 THAP9Q9H5L6 903 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 VIPAS39Q9H9C1 493 aa23.53■■□□□ 1.36
PTPN18-202ENST00000347849 PVALEFA0A1B0GWK0 134 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 CIITAP33076 1130 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 SKIDA1Q1XH10 827 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 WDR18Q9BV38 432 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 IGLV3-22A0A075B6J6 115 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 SEMA3FQ13275 785 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 NBPF12Q5TAG4 269 aaPredicted RBP23.52■■□□□ 1.36
PTPN18-202ENST00000347849 KIAA1328Q86T90 577 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 LDHDQ86WU2 507 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 SLFN12Q8IYM2 578 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 AFAP1L1Q8TED9 768 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 DNAJC7Q99615 494 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 TBC1D7Q9P0N9 293 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 HPCAL4Q9UM19 191 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 ZNF541Q9H0D2 1346 aa23.52■■□□□ 1.36
PTPN18-202ENST00000347849 PLA2G4BP0C869 781 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 SPATA31C1P0DKV0 1188 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 MAP9Q49MG5 647 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 CAPN11Q9UMQ6 739 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 PTGER2P43116 358 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 AARSP49588 968 aaKnown RBP eCLIP23.51■■□□□ 1.35
PTPN18-202ENST00000347849 PAPD7Q5XG87 772 aaKnown RBP23.51■■□□□ 1.35
PTPN18-202ENST00000347849 ZNF507Q8TCN5 953 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 JAKMIP2Q96AA8 810 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 DEFB129Q9H1M3 183 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 VAV3Q9UKW4 847 aa23.51■■□□□ 1.35
PTPN18-202ENST00000347849 ZNF536O15090 1300 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 LGALS16A8MUM7 142 aa23.5■■□□□ 1.35
PTPN18-202ENST00000347849 B4DLN1 442 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms