RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 SEMA3FQ13275 785 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 EMBQ6PCB8 327 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 POTEGQ6S5H5 508 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 HAS1Q92839 578 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 CEP72Q9P209 647 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
SMTN-202ENST00000347557 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 PPP1R11O60927 126 aaPredicted RBP16.02■□□□□ 0.16
SMTN-202ENST00000347557 SLC9A1P19634 815 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 PABPC4Q13310 644 aaKnown RBP eCLIP16.02■□□□□ 0.165e-6■□□□□ 10.8
SMTN-202ENST00000347557 DDX42Q86XP3 938 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMTN-202ENST00000347557 CUL5Q93034 780 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 DNAJC19Q96DA6 116 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 IQCDQ96DY2 449 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 LRRC27Q9C0I9 530 aa16.02■□□□□ 0.16
SMTN-202ENST00000347557 SNED1Q8TER0 1413 aa16.02■□□□□ 0.15
SMTN-202ENST00000347557 NR2F2P24468 414 aa16.02■□□□□ 0.15
SMTN-202ENST00000347557 DONSONQ9NYP3 566 aa16.02■□□□□ 0.15
SMTN-202ENST00000347557 PRLRP16471 622 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 PLCG2P16885 1265 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
SMTN-202ENST00000347557 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
SMTN-202ENST00000347557 RHBDL3P58872 404 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 PAK2Q13177 524 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 NGLY1Q96IV0 654 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 EIF3HO15372 352 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMTN-202ENST00000347557 PDIA5Q14554 519 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 CEP85LQ5SZL2 805 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 OR2W6PQ8NHA6 318 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 ROBO3Q96MS0 1386 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 ASTE1Q2TB18 679 aaPredicted RBP16.01■□□□□ 0.15
SMTN-202ENST00000347557 FAM196AQ6ZSG2 479 aa16.01■□□□□ 0.15
SMTN-202ENST00000347557 PNMA6FA0A0J9YX94 578 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SFI1A8K8P3 1242 aa16■□□□□ 0.15
SMTN-202ENST00000347557 CETN3O15182 167 aa16■□□□□ 0.15
SMTN-202ENST00000347557 RAD51CO43502 376 aa16■□□□□ 0.15
SMTN-202ENST00000347557 TCP10Q12799 353 aa16■□□□□ 0.15
SMTN-202ENST00000347557 PSMD2Q13200 908 aa16■□□□□ 0.15
SMTN-202ENST00000347557 RPS6KA1Q15418 735 aa16■□□□□ 0.15
SMTN-202ENST00000347557 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
SMTN-202ENST00000347557 PRR16Q569H4 304 aa16■□□□□ 0.15
SMTN-202ENST00000347557 RNF187Q5TA31 235 aaPredicted RBP16■□□□□ 0.15
SMTN-202ENST00000347557 ADAT2Q7Z6V5 191 aaKnown RBP16■□□□□ 0.15
SMTN-202ENST00000347557 TRIM31Q9BZY9 425 aa16■□□□□ 0.15
SMTN-202ENST00000347557 BCAS3Q9H6U6 928 aa16■□□□□ 0.15
SMTN-202ENST00000347557 H0YHG0 523 aa16■□□□□ 0.15
SMTN-202ENST00000347557 CLIC2O15247 247 aa16■□□□□ 0.15
SMTN-202ENST00000347557 ERLIN2O94905 339 aa16■□□□□ 0.15
SMTN-202ENST00000347557 LCA5LO95447 670 aa16■□□□□ 0.15
SMTN-202ENST00000347557 CASP5P51878 434 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SEC24CP53992 1094 aa16■□□□□ 0.15
SMTN-202ENST00000347557 CACNB3P54284 484 aa16■□□□□ 0.15
SMTN-202ENST00000347557 PTK2Q05397 1052 aa16■□□□□ 0.15
SMTN-202ENST00000347557 NAB2Q15742 525 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SLC18A3Q16572 532 aa16■□□□□ 0.15
SMTN-202ENST00000347557 USH1GQ495M9 461 aa16■□□□□ 0.15
SMTN-202ENST00000347557 ALS2CLQ60I27 953 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
SMTN-202ENST00000347557 TADA2BQ86TJ2 420 aa16■□□□□ 0.15
SMTN-202ENST00000347557 RNF10Q8N5U6 811 aaKnown RBP16■□□□□ 0.15
SMTN-202ENST00000347557 RNF217Q8TC41 542 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SCFD1Q8WVM8 642 aa16■□□□□ 0.15
SMTN-202ENST00000347557 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
SMTN-202ENST00000347557 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
SMTN-202ENST00000347557 SCN7AQ01118 1682 aa16■□□□□ 0.15
SMTN-202ENST00000347557 PJA2O43164 708 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 SF3A3Q12874 501 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■■■□ 21.8
SMTN-202ENST00000347557 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
SMTN-202ENST00000347557 NBPF20Q3BBV1 942 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 NAA35Q5VZE5 725 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 IRS2Q9Y4H2 1338 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 ESYT2A0FGR8 921 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 ZNF233A6NK53 670 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 PSMC6P62333 389 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 PRPF4BQ13523 1007 aaKnown RBP15.99■□□□□ 0.15
SMTN-202ENST00000347557 ODF2Q5BJF6 829 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 GJB7Q6PEY0 223 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
SMTN-202ENST00000347557 USP40Q9NVE5 1235 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 GRID2IPA4D2P6 1211 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 G3V3G9 751 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 TTLL1O95922 423 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 ZNF543Q08ER8 600 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 FBXW10Q5XX13 1052 aa15.99■□□□□ 0.15
SMTN-202ENST00000347557 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms