RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 AFG3L2Q9Y4W6 797 aa11.85□□□□□ -0.51
CLCN6-202ENST00000346436 GRIN1Q05586 938 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 FAM81BQ96LP2 452 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 FAM49AQ9H0Q0 323 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 IPO11Q9UI26 975 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 SLC12A2P55011 1212 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 LACTBP83111 547 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 RASSF7Q02833 373 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 KCTD16Q68DU8 428 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 HAUS4Q9H6D7 363 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 HERC5Q9UII4 1024 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 GTF2A2P52657 109 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 HADHQ16836 314 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 RNF139Q8WU17 664 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 SPATA31A1Q5TZJ5 1347 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 PP2D1A8MPX8 630 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 MFAP3LO75121 409 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 CLUL1Q15846 466 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 RNF180Q86T96 592 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 BPIFA3Q9BQP9 254 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 CCL15-CCL14A0A0B4J2E2 113 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 CAPN15O75808 1086 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 RARBP10826 455 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 SARNPP82979 210 aaKnown RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 MECOMQ03112 1051 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 CCL15Q16663 113 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
CLCN6-202ENST00000346436 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 CCDC68Q9H2F9 335 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 PCDHA4Q9UN74 947 aa11.84□□□□□ -0.51
CLCN6-202ENST00000346436 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 HNRNPH2P55795 449 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 PPP1R21Q6ZMI0 780 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ANKRD7Q92527 254 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 FAM8A1Q9UBU6 413 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 NEURL4Q96JN8 1562 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 HGSO14964 777 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ITKQ08881 620 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 CPLX4Q7Z7G2 160 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 EFCAB13Q8IY85 973 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 HNRNPDLO14979 420 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 CFAP157Q5JU67 520 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 GSPT2Q8IYD1 628 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 TSPY1Q01534 308 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 TNFAIP2Q03169 654 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 TCP11X2Q5H9J9 407 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
CLCN6-202ENST00000346436 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 ARRDC4Q8NCT1 418 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 STAG1Q8WVM7 1258 aa11.83□□□□□ -0.52
CLCN6-202ENST00000346436 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 CHRNA5P30532 468 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 JAK3P52333 1124 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 NFIXQ14938 502 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 PPP1R2P3Q6NXS1 205 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 C4orf50Q6ZRC1 276 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 KCNB2Q92953 911 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 NDUFA10O95299 355 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 MOCS3O95396 460 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 GNGT1P63211 74 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 SPP2Q13103 211 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 KRT81Q14533 505 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 CFAP221Q4G0U5 840 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 CCDC121Q6ZUS5 278 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 POMGNT1Q8WZA1 660 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 IQCDQ96DY2 449 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 HDAC6Q9UBN7 1215 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 UTYO14607 1347 aa11.82□□□□□ -0.52
CLCN6-202ENST00000346436 PRDX5P30044 214 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms