RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 GKAP1Q5VSY0 366 aaPredicted RBP23.47■■□□□ 1.35
TRIM3-201ENST00000345851 RNF10Q8N5U6 811 aaKnown RBP23.47■■□□□ 1.35
TRIM3-201ENST00000345851 C1orf131Q8NDD1 294 aaKnown RBP23.47■■□□□ 1.35
TRIM3-201ENST00000345851 NFS1Q9Y697 457 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 UBR3Q6ZT12 1888 aa23.47■■□□□ 1.35
TRIM3-201ENST00000345851 SRRM3A6NNA2 597 aaPredicted RBP23.46■■□□□ 1.35
TRIM3-201ENST00000345851 SLC8A1P32418 973 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 FLT3P36888 993 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 MAGOHP61326 146 aaKnown RBP23.46■■□□□ 1.35
TRIM3-201ENST00000345851 CHADLQ6NUI6 762 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 PDXDC1Q6P996 788 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 MAGOHBQ96A72 148 aaKnown RBP23.46■■□□□ 1.35
TRIM3-201ENST00000345851 ATP6V0A4Q9HBG4 840 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 USP17L12C9JPN9 530 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 USP17L21D6R901 530 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 CYP2D6P10635 497 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 ECHS1P30084 290 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 XRCC4Q13426 336 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 HGSNATQ68CP4 663 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 TLDC1Q6P9B6 456 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 CABP7Q86V35 215 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 MDM1Q8TC05 714 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.46■■□□□ 1.35
TRIM3-201ENST00000345851 FBXL5Q9UKA1 691 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 KCNK3O14649 394 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 UFL1O94874 794 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 USP38Q8NB14 1042 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 LRRC4CQ9HCJ2 640 aa23.46■■□□□ 1.35
TRIM3-201ENST00000345851 PPP1R12AO14974 1030 aaPredicted RBP23.45■■□□□ 1.34
TRIM3-201ENST00000345851 ADRA2BP18089 450 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 SLC27A3Q5K4L6 730 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 TATDN2Q93075 761 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 AP1M1Q9BXS5 423 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 PACSIN1Q9BY11 444 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 ISCUQ9H1K1 167 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 NOD2Q9HC29 1040 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 MYL1P05976 194 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 MAN2A1Q16706 1144 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 LRIG3Q6UXM1 1119 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 STAMBPL1Q96FJ0 436 aa23.45■■□□□ 1.34
TRIM3-201ENST00000345851 DDAH1O94760 285 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 ATP6V1G2O95670 118 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 ELF3P78545 371 aaPredicted RBP23.44■■□□□ 1.34
TRIM3-201ENST00000345851 CCDC84Q86UT8 332 aaPredicted RBP23.44■■□□□ 1.34
TRIM3-201ENST00000345851 DZIP1Q86YF9 867 aaKnown RBP23.44■■□□□ 1.34
TRIM3-201ENST00000345851 TCP11Q8WWU5 503 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 CCT6BQ92526 530 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 THOC1Q96FV9 657 aaKnown RBP23.44■■□□□ 1.34
TRIM3-201ENST00000345851 CCSER1Q9C0I3 900 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 MTMR7Q9Y216 660 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 POLRMTO00411 1230 aaKnown RBP23.44■■□□□ 1.34
TRIM3-201ENST00000345851 MYO1EQ12965 1108 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 FMNL3Q8IVF7 1028 aa23.44■■□□□ 1.34
TRIM3-201ENST00000345851 GRID2IPA4D2P6 1211 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 MGRN1O60291 552 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 BUB1BO60566 1050 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-201ENST00000345851 KIAA0753Q2KHM9 967 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 KRT71Q3SY84 523 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 MEI1Q5TIA1 1274 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 RUFY4Q6ZNE9 571 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 TBC1D5Q92609 795 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 LRRC45Q96CN5 670 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 IQCDQ96DY2 449 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 PNMA8AQ86V59 439 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-201ENST00000345851 COL23A1Q86Y22 540 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-201ENST00000345851 MAGEC3Q8TD91 643 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 TAF4BQ92750 862 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 IRS2Q9Y4H2 1338 aa23.43■■□□□ 1.34
TRIM3-201ENST00000345851 RTN2O75298 545 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 CLSTN1O94985 981 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 CLTAP09496 248 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 CALML3P27482 149 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 IFFO1Q0D2I5 559 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 SLC9C1Q4G0N8 1177 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 STAG2Q8N3U4 1231 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 DDX47Q9H0S4 455 aaKnown RBP23.42■■□□□ 1.34
TRIM3-201ENST00000345851 ANAPC4Q9UJX5 808 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 CEP104O60308 925 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 TLR2O60603 784 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 BIRC3Q13489 604 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 NAB2Q15742 525 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 LACTB2Q53H82 288 aaPredicted RBP23.42■■□□□ 1.34
TRIM3-201ENST00000345851 TCP11L1Q9NUJ3 509 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 PCDHA4Q9UN74 947 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 C5orf60A6NFR6 353 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 DYMQ7RTS9 669 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 DNAAF5Q86Y56 855 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 C3orf20Q8ND61 904 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 NSMCE1Q8WV22 266 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 L3MBTL1Q9Y468 752 aa23.42■■□□□ 1.34
TRIM3-201ENST00000345851 SSU72P8A0A1W2PR75 194 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 RIMBP2O15034 1052 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 CNNM4Q6P4Q7 775 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 RSRC1Q96IZ7 334 aaKnown RBP23.41■■□□□ 1.34
TRIM3-201ENST00000345851 FLT1P17948 1338 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 F8W031 263 aaPredicted RBP23.41■■□□□ 1.34
TRIM3-201ENST00000345851 DRD4P21917 467 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 CDC25CP30307 473 aa23.41■■□□□ 1.34
TRIM3-201ENST00000345851 CCNHP51946 323 aaPredicted RBP23.41■■□□□ 1.34
TRIM3-201ENST00000345851 KANSL2Q9H9L4 492 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms