RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PRR12Q9ULL5 1215 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 BHMT2Q9H2M3 363 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 MFAP3P55082 362 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 NT5C1BQ96P26 610 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 KIF28PB7ZC32 967 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 RNF180Q86T96 592 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 SGMS1Q86VZ5 419 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 PPM1KQ8N3J5 372 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 PIGOQ8TEQ8 1089 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 UPP2O95045 317 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 NR2F2P24468 414 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 MYL7Q01449 175 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 THNSL1Q8IYQ7 743 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 MAIP1Q8WWC4 291 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 ATP6V0A4Q9HBG4 840 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 GABBR1Q9UBS5 961 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 RCOR1Q9UKL0 485 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 FAM184BQ9ULE4 1060 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 TUBBP07437 444 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF302Q9NR11 478 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 PTPREP23469 700 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 DISC1Q9NRI5 854 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 A0A087WWV3 80 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 BACE1P56817 501 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 TSKSQ9UJT2 592 aa17.92■□□□□ 0.46
SMARCA4-201ENST00000344626 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 NDC80O14777 642 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 RASA1P20936 1047 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF543Q08ER8 600 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 PCDHB6Q9Y5E3 794 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 IPO5O00410 1097 aaKnown RBP17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 TOB2Q14106 344 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 PLEKHH3Q7Z736 793 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 DACT2Q5SW24 774 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 FAM186BQ8IYM0 893 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 TMEM260Q9NX78 707 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 DDTLA6NHG4 134 aaPredicted RBP17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 PDHXO00330 501 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 MYO1EQ12965 1108 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 EXOC3L4Q17RC7 722 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 BANK1Q8NDB2 785 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 OR8K1Q8NGG5 319 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 RBSNQ9H1K0 784 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
SMARCA4-201ENST00000344626 PTK2Q05397 1052 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 MCM6Q14566 821 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 LONRF3Q496Y0 759 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF658Q5TYW1 1059 aaPredicted RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PSPC1Q8WXF1 523 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 NOGQ13253 232 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 P2RX5Q93086 422 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 NAPGQ99747 312 aaPredicted RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 MYO1AQ9UBC5 1043 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 STAM2O75886 525 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 NR3C2P08235 984 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PLCG1P19174 1290 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 VAV2P52735 878 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PPP4CP60510 307 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 HADHQ16836 314 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 TSGA10IPQ3SY00 556 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 SPZ1Q9BXG8 430 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 LDHAP00338 332 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 USP11P51784 963 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 FKBP3Q00688 224 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 CFAP58Q5T655 872 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 U2AF1L4Q8WU68 220 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PHKA2P46019 1235 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 CYFIP1Q7L576 1253 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PCIF1Q9H4Z3 704 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 RPF1Q9H9Y2 349 aaKnown RBP17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 GJB4Q9NTQ9 266 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 PCDHA5Q9Y5H7 936 aa17.9■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF609O15014 1411 aa17.89■□□□□ 0.46
SMARCA4-201ENST00000344626 KIF11P52732 1056 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 PEX3P56589 373 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 FAM83AQ86UY5 434 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 AGBL1Q96MI9 1066 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 NMRK2Q9NPI5 230 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 PPP1R2P3Q6NXS1 205 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 EMILIN3Q9NT22 766 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 DSTYKQ6XUX3 929 aa17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 ARL1P40616 181 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-201ENST00000344626 TNFAIP2Q03169 654 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms