RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ST7Q9NRC1 585 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BAIAP3O94812 1187 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CYP4F2P78329 520 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 EIF4G1Q04637 1599 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CYP4F3Q08477 520 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BEND6Q5SZJ8 279 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 POTEAQ6S8J7 498 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TANGO6Q9C0B7 1094 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 VWA5AO00534 786 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TYK2P29597 1187 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 EPHB4P54760 987 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TFAP4Q01664 338 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HAUS3Q68CZ6 603 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC82Q8N4S0 544 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CIDECQ96AQ7 238 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BRINP2Q9C0B6 783 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ALDH8A1Q9H2A2 487 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMCC3Q9ULS5 477 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HPS5Q9UPZ3 1129 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ATAD2BQ9ULI0 1458 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CSDE1O75534 798 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM23P36406 574 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PPARGP37231 505 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CLEC4GQ6UXB4 293 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TSPYL6Q8N831 410 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TTC29Q8NA56 475 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ZKSCAN4Q969J2 545 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PANX2Q96RD6 677 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CYLDQ9NQC7 956 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINA10Q9UK55 444 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PCDHGC5Q9Y5F6 944 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 GNAI3P08754 354 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 U2AF1L5P0DN76 240 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ESRRAP11474 423 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KIF11P52732 1056 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CCZ1BP86790 482 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CCZ1P86791 482 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 U2AF1Q01081 240 aaKnown RBP eCLIP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KAZNQ674X7 775 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 NOP9Q86U38 636 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 VPS37BQ9H9H4 285 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMC6Q7Z403 805 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 AGGF1Q8N302 714 aaeCLIP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SCG3Q8WXD2 468 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KAT2BQ92831 832 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 RBM17Q96I25 401 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CARD14Q9BXL6 1004 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TEX12Q9BXU0 123 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KLHL41O60662 606 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ZSCAN22P10073 491 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ANXA13P27216 316 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 RNF169Q8NCN4 708 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CCPG1Q9ULG6 757 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 NUP155O75694 1391 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 IFIT3O14879 490 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 IRAK1P51617 712 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SPATA5Q8NB90 893 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HNRNPABQ99729 332 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ARPC5LQ9BPX5 153 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 C1orf50Q9BV19 199 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 AATFQ9NY61 560 aaKnown RBP eCLIP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 IFNKQ9P0W0 207 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 XPO7Q9UIA9 1087 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CREB3L3Q68CJ9 461 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KRT74Q7RTS7 529 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 DDX58O95786 925 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMTC3Q6ZXV5 915 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SCYL3Q8IZE3 742 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 KLHL25Q9H0H3 589 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BAG5Q9UL15 447 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 IFNAR2P48551 515 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TBCCQ15814 346 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 BORAQ6PGQ7 559 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 LRIG3Q6UXM1 1119 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PDCD10Q9BUL8 212 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 NACAP1Q9BZK3 213 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 OSBPL3Q9H4L5 887 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC87Q9NVE4 849 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 ASAP2O43150 1006 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 LCA5LO95447 670 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HSPA6P17066 643 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 HOXB6P17509 224 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 EEF1GP26641 437 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 NFRKBQ6P4R8 1299 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SPDYE1Q8NFV5 336 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 PSPC1Q8WXF1 523 aaKnown RBP4.05□□□□□ -1.76
SYNE2-202ENST00000344113 SEPT1Q8WYJ6 367 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM168Q9H0V1 697 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 TCF7L2Q9NQB0 619 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 USP40Q9NVE5 1235 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 NACADO15069 1562 aa4.05□□□□□ -1.76
SYNE2-202ENST00000344113 GOLGA8MH3BSY2 632 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 RCVRNP35243 200 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MTIF2P46199 727 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PARP6Q2NL67 630 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MIS18BP1Q6P0N0 1132 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CYP2U1Q7Z449 544 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PLK2Q9NYY3 685 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ARHGEF12Q9NZN5 1544 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PLA2G4AP47712 749 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms