RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 STOX1Q6ZVD7 989 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MORC4Q8TE76 937 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 GDAQ9Y2T3 454 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ARHGAP27Q6ZUM4 889 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MMGT1Q8N4V1 131 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ANAPC5Q9UJX4 755 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 CD2APQ9Y5K6 639 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 FAM208AQ9UK61 1670 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RASA4BC9J798 803 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MYO1FO00160 1098 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RASA4O43374 803 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 CHRNA3P32297 505 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SERPINB6P35237 376 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 DCUN1D2Q6PH85 259 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 OGFOD1Q8N543 542 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF446Q9NWS9 450 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RAB20Q9NX57 234 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TBK1Q9UHD2 729 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ERCC6L2Q5T890 1561 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 FGGP02679 453 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ESRRAP11474 423 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 FAM178BQ8IXR5 827 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ST13P4Q8IZP2 240 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 NME8Q8N427 588 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 DDX27Q96GQ7 796 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SGSM3Q96HU1 749 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 STRBPQ96SI9 672 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ANKZF1Q9H8Y5 726 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 EMILIN3Q9NT22 766 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 OVOS2A0A0G2JMS6 1433 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 GYG2O15488 501 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 INHBAP08476 426 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SPARCL1Q14515 664 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RDH13Q8NBN7 331 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 HOOK2Q96ED9 719 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SUGCTQ9HAC7 445 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 EXOC1LA0A1B0GW35 172 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RASSF10A6NK89 507 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 AGTP01019 485 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 AP2B1P63010 937 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PTK2Q05397 1052 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 KLC1Q07866 573 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 NAA35Q5VZE5 725 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TBC1D10CQ8IV04 446 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 LCORLQ8N3X6 602 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TGS1Q96RS0 853 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PNKPQ96T60 521 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 NUF2Q9BZD4 464 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PUS3Q9BZE2 481 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 POC1B-GALNT4F8VUJ3 575 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 BRD2P25440 801 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RWDD2BP57060 319 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ALX1Q15699 326 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 CYB5D1Q6P9G0 228 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TRIM65Q6PJ69 517 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RAD9BQ6WBX8 426 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 CYFIP2Q96F07 1278 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 DIP2CQ9Y2E4 1556 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 SLC1A4P43007 532 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 BCAMP50895 628 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 MYL7Q01449 175 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PLS1Q14651 629 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 APBB1IPQ7Z5R6 666 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 RIN2Q8WYP3 895 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 GFM2Q969S9 779 aaKnown RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 ZNF512BQ96KM6 892 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-203ENST00000343508 TTC25Q96NG3 672 aa5.18□□□□□ -1.58
CSMD3-203ENST00000343508 PTPRUQ92729 1446 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 ARHGAP42A6NI28 874 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 TULP2O00295 520 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 ZBTB17Q13105 803 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 OTUD6AQ7L8S5 288 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 ADAT2Q7Z6V5 191 aaKnown RBP5.17□□□□□ -1.58
CSMD3-203ENST00000343508 FAM186BQ8IYM0 893 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CFAP61Q8NHU2 1237 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 BRIP1Q9BX63 1249 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 TMEM206Q9H813 350 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 PRR36Q9H6K5 1346 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CHRNDQ07001 517 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 FAM83BQ5T0W9 1011 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 STAG2Q8N3U4 1231 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 GUF1Q8N442 669 aaKnown RBP5.17□□□□□ -1.58
CSMD3-203ENST00000343508 ECT2Q9H8V3 914 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CD163L1Q9NR16 1453 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 KNDC1Q76NI1 1749 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CDK17Q00537 523 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 MESDQ14696 234 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CDAN1Q8IWY9 1227 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 NOA1Q8NC60 698 aaKnown RBP5.17□□□□□ -1.58
CSMD3-203ENST00000343508 IGDCC4Q8TDY8 1250 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 SMCR8Q8TEV9 937 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-203ENST00000343508 PVALEFA0A1B0GWK0 134 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 SASH3O75995 380 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 CDC25AP30304 524 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 ACTN3Q08043 901 aaPredicted RBP5.17□□□□□ -1.58
CSMD3-203ENST00000343508 AOC3Q16853 763 aa5.17□□□□□ -1.58
CSMD3-203ENST00000343508 NAALADL2Q58DX5 795 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms