RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 C15orf41Q9Y2V0 281 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 NR2E1Q9Y466 385 aa16.26■□□□□ 0.19
CLCN1-201ENST00000343257 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 TRIM28Q13263 835 aaKnown RBP16.25■□□□□ 0.19
CLCN1-201ENST00000343257 TMC3Q7Z5M5 1100 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 ARMC2Q8NEN0 867 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 CDK5RAP3Q96JB5 506 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 TRIM33Q9UPN9 1127 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 F8VZ95 297 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
CLCN1-201ENST00000343257 CUL1Q13616 776 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 ZNF570Q96NI8 536 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 ZHX3Q9H4I2 956 aa16.25■□□□□ 0.19
CLCN1-201ENST00000343257 LUC7LQ9NQ29 371 aaKnown RBP16.25■□□□□ 0.19
CLCN1-201ENST00000343257 SSU72P8A0A1W2PR75 194 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 UBOX5O94941 541 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 EPS15P42566 896 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 SLC18A3Q16572 532 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
CLCN1-201ENST00000343257 ZNF483Q8TF39 744 aaPredicted RBP16.24■□□□□ 0.19
CLCN1-201ENST00000343257 CALML4Q96GE6 196 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 SAMD15Q9P1V8 674 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 AMPD3Q01432 767 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 ASIC2Q16515 512 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 ERMARDQ5T6L9 678 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 AGBL2Q5U5Z8 902 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 CAPRIN2Q6IMN6 1127 aaKnown RBP16.24■□□□□ 0.19
CLCN1-201ENST00000343257 FAM129AQ9BZQ8 928 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 CHD4Q14839 1912 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
CLCN1-201ENST00000343257 AP1G2O75843 785 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 MYBP10242 640 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
CLCN1-201ENST00000343257 EGFL6Q8IUX8 553 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 MAGEC3Q8TD91 643 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 MTA3Q9BTC8 594 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
CLCN1-201ENST00000343257 POTEMA6NI47 508 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 PLTPP55058 493 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 THEMIS2Q5TEJ8 643 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 TMED8Q6PL24 325 aaPredicted RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 ERICH1Q86X53 443 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 MMTAG2Q9BU76 263 aaKnown RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 FGFBP2Q9BYJ0 223 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 PTK2Q05397 1052 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 ZKSCAN8Q15776 578 aaPredicted RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 OTUD6AQ7L8S5 288 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 SCFD2Q8WU76 684 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 GLG1Q92896 1179 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 HOOK2Q96ED9 719 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 DYNLL2Q96FJ2 89 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 INTS9Q9NV88 658 aaKnown RBP16.23■□□□□ 0.19
CLCN1-201ENST00000343257 TMOD3Q9NYL9 352 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
CLCN1-201ENST00000343257 FOXO6A8MYZ6 492 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TFAP4Q01664 338 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TRPM8Q7Z2W7 1104 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 ARHGEF10LQ9HCE6 1279 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 CEP72Q9P209 647 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 SNX24Q9Y343 169 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 MYL1P05976 194 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 NAPAP54920 295 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 ZNF211Q13398 564 aaPredicted RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 C1orf131Q8NDD1 294 aaKnown RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TSG101Q99816 390 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TMEM59LQ9UK28 342 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 DBR1Q9UK59 544 aaKnown RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 STX8Q9UNK0 236 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 UTP11Q9Y3A2 253 aaKnown RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
CLCN1-201ENST00000343257 FGGP02679 453 aa16.22■□□□□ 0.19
CLCN1-201ENST00000343257 BRD2P25440 801 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms