RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 AKR1A1P14550 325 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 ALDH5A1P51649 535 aaPredicted RBP11.82□□□□□ -0.52
TPM3-207ENST00000341372 HSD17B4P51659 736 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 IRF2BPLQ9H1B7 796 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 ACVR2BQ13705 512 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 RTN1Q16799 776 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 ADAM32Q8TC27 787 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
TPM3-207ENST00000341372 BRF1Q92994 677 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
TPM3-207ENST00000341372 CYLDQ9NQC7 956 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 COL20A1Q9P218 1284 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 GABBR1Q9UBS5 961 aa11.82□□□□□ -0.52
TPM3-207ENST00000341372 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 GOLGA8BA8MQT2 603 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 FZD6O60353 706 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 COL6A1P12109 1028 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 CALML3P27482 149 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 CNGA1P29973 690 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 TBC1D5Q92609 795 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 SRA1Q9HD15 236 aaKnown RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 DNM1LO00429 736 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 CDC27P30260 824 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 DIS3LQ8TF46 1054 aaKnown RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 DMRTB1Q96MA1 342 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 CITED4Q96RK1 184 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 SEC63Q9UGP8 760 aaKnown RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 ZHX1Q9UKY1 873 aaPredicted RBP11.81□□□□□ -0.52
TPM3-207ENST00000341372 FAM184BQ9ULE4 1060 aa11.81□□□□□ -0.52
TPM3-207ENST00000341372 KIAA1217Q5T5P2 1943 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 ADCY6O43306 1168 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 NKX3-2P78367 333 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 CMTR1Q8N1G2 835 aaKnown RBP11.8□□□□□ -0.52
TPM3-207ENST00000341372 FAM129BQ96TA1 746 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 UPF3BQ9BZI7 483 aaKnown RBP11.8□□□□□ -0.52
TPM3-207ENST00000341372 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
TPM3-207ENST00000341372 G3BP2Q9UN86 482 aaKnown RBP11.8□□□□□ -0.52
TPM3-207ENST00000341372 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
TPM3-207ENST00000341372 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 ADAMTS4O75173 837 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 RARBP10826 455 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 METAP2P50579 478 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPM3-207ENST00000341372 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 MPHOSPH6Q99547 160 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 UPF3AQ9H1J1 476 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 CFBP00751 764 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 FBXO16Q8IX29 292 aaPredicted RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 ARRDC4Q8NCT1 418 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 MRFAP1L1Q96HT8 127 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 TAAR1Q96RJ0 339 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.523e-15■■■□□ 16.8
TPM3-207ENST00000341372 SAP130Q9H0E3 1048 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 C11orf49Q9H6J7 331 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
TPM3-207ENST00000341372 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
TPM3-207ENST00000341372 SYNRGQ9UMZ2 1314 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 B4DLN1 442 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 PDIA3P30101 505 aaKnown RBP11.78□□□□□ -0.52
TPM3-207ENST00000341372 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
TPM3-207ENST00000341372 LRRC41Q15345 812 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
TPM3-207ENST00000341372 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
TPM3-207ENST00000341372 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.52
TPM3-207ENST00000341372 ENPP3O14638 875 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 CEP290O15078 2479 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 POLR2MP0CAP2 368 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.52
TPM3-207ENST00000341372 EIF1AXP47813 144 aaKnown RBP11.77□□□□□ -0.52
TPM3-207ENST00000341372 GJA9P57773 515 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 NTRK3Q16288 839 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 CCSAPQ6IQ19 270 aaPredicted RBP11.77□□□□□ -0.52
TPM3-207ENST00000341372 KLHDC9Q8NEP7 349 aa11.77□□□□□ -0.52
TPM3-207ENST00000341372 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms