RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 ZNF622Q969S3 477 aaKnown RBP eCLIP16.8■□□□□ 0.28
PERM1-201ENST00000341290 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.28
PERM1-201ENST00000341290 GUCY1A3Q02108 690 aa16.8■□□□□ 0.28
PERM1-201ENST00000341290 CFAP221Q4G0U5 840 aa16.8■□□□□ 0.28
PERM1-201ENST00000341290 SFMBT2Q5VUG0 894 aa16.8■□□□□ 0.28
PERM1-201ENST00000341290 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
PERM1-201ENST00000341290 FAM107BQ9H098 131 aa16.8■□□□□ 0.28
PERM1-201ENST00000341290 A0A087X0T9 212 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 E9PMD0 336 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 NOL4O94818 638 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 FAM228BP0C875 321 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 KIAA0753Q2KHM9 967 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 ASTE1Q2TB18 679 aaPredicted RBP16.79■□□□□ 0.28
PERM1-201ENST00000341290 TSG101Q99816 390 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 MYH1P12882 1939 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 OPA1O60313 960 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 ACTN1P12814 892 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 ADCY7P51828 1080 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 COASYQ13057 564 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 SLC9C1Q4G0N8 1177 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 TADA2BQ86TJ2 420 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
PERM1-201ENST00000341290 GOLGA8KD6RF30 607 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
PERM1-201ENST00000341290 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 SHTN1A0MZ66 631 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 F8W031 263 aaPredicted RBP16.78■□□□□ 0.28
PERM1-201ENST00000341290 NDUFAB1O14561 156 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 LCA5LO95447 670 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 FBXW10Q5XX13 1052 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 ZNF233A6NK53 670 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 PRLRP16471 622 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 CFAP58Q5T655 872 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 EMBQ6PCB8 327 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
PERM1-201ENST00000341290 FGFR1OPO95684 399 aaKnown RBP16.77■□□□□ 0.28
PERM1-201ENST00000341290 PDHBP11177 359 aa16.77■□□□□ 0.28
PERM1-201ENST00000341290 PPP1R2P41236 205 aa16.77■□□□□ 0.28
PERM1-201ENST00000341290 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
PERM1-201ENST00000341290 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
PERM1-201ENST00000341290 KAT2BQ92831 832 aa16.77■□□□□ 0.28
PERM1-201ENST00000341290 RNPC3Q96LT9 517 aaKnown RBP16.77■□□□□ 0.28
PERM1-201ENST00000341290 NPR1P16066 1061 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.27
PERM1-201ENST00000341290 TGFB2P61812 414 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 SUGP1Q8IWZ8 645 aaKnown RBP16.77■□□□□ 0.27
PERM1-201ENST00000341290 IFT20Q8IY31 132 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 CASKIN2Q8WXE0 1202 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 DONSONQ9NYP3 566 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 STK17AQ9UEE5 414 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.27
PERM1-201ENST00000341290 ERLIN2O94905 339 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 EPS15P42566 896 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 GSTO1P78417 241 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 FKBP3Q00688 224 aaKnown RBP16.76■□□□□ 0.27
PERM1-201ENST00000341290 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 HLTFQ14527 1009 aaKnown RBP eCLIP16.76■□□□□ 0.27
PERM1-201ENST00000341290 HERC4Q5GLZ8 1057 aaPredicted RBP16.76■□□□□ 0.27
PERM1-201ENST00000341290 MAATS1Q7Z4T9 603 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
PERM1-201ENST00000341290 OR2W6PQ8NHA6 318 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 DDX25Q9UHL0 483 aaKnown RBP16.76■□□□□ 0.27
PERM1-201ENST00000341290 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.76■□□□□ 0.27
PERM1-201ENST00000341290 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 STAT3P40763 770 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 SEC24CP53992 1094 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 GRAPQ13588 217 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 ZNF572Q7Z3I7 529 aaPredicted RBP16.76■□□□□ 0.27
PERM1-201ENST00000341290 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
PERM1-201ENST00000341290 AP1M1Q9BXS5 423 aa16.76■□□□□ 0.27
PERM1-201ENST00000341290 KCNK3O14649 394 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 PJA2O43164 708 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
PERM1-201ENST00000341290 HAS1Q92839 578 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 DNAJC19Q96DA6 116 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 A0A087WUV0 522 aaPredicted RBP16.75■□□□□ 0.27
PERM1-201ENST00000341290 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 POTECB2RU33 542 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 RAD51CO43502 376 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 SERPING1P05155 500 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 RBM17Q96I25 401 aaKnown RBP16.75■□□□□ 0.27
PERM1-201ENST00000341290 RAB34Q9BZG1 259 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
PERM1-201ENST00000341290 KRT18P05783 430 aaKnown RBP16.75■□□□□ 0.27
PERM1-201ENST00000341290 AKR1B1P15121 316 aa16.75■□□□□ 0.27
PERM1-201ENST00000341290 POLD1P28340 1107 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms