RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 GSDMAQ96QA5 445 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 ATP8A1Q9Y2Q0 1164 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 C21orf2O43822 256 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 ECEL1O95672 775 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 CLTAP09496 248 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 IL9RQ01113 521 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
TNC-201ENST00000341037 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
TNC-201ENST00000341037 GSTA4O15217 222 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 TOM1L1O75674 476 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 TTC4O95801 387 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 MRPL46Q9H2W6 279 aaKnown RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 CDC25BP30305 580 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 SOX5P35711 763 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 STX1BP61266 288 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 EXT2Q93063 718 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 MRFAP1L1Q96HT8 127 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 GRAPQ13588 217 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 EXOC8Q8IYI6 725 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 GCNAQ96QF7 691 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 POLIQ9UNA4 740 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 SYNMO15061 1565 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 GNGT2O14610 69 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 BANK1Q8NDB2 785 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 SUDS3Q9H7L9 328 aaPredicted RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 SAMSN1Q9NSI8 373 aaKnown RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 SLCO1A2P46721 670 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 RNF139Q8WU17 664 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
TNC-201ENST00000341037 KDM5DQ9BY66 1539 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 KDM5CP41229 1560 aa12.31□□□□□ -0.44
TNC-201ENST00000341037 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 EPHB1P54762 984 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 BCAS4Q8TDM0 211 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 RWDD2AQ9UIY3 292 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 G3BP2Q9UN86 482 aaKnown RBP12.3□□□□□ -0.44
TNC-201ENST00000341037 DAAM1Q9Y4D1 1078 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PNMA6FA0A0J9YX94 578 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 NPR1P16066 1061 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 INTS9Q9NV88 658 aaKnown RBP12.3□□□□□ -0.44
TNC-201ENST00000341037 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PLS3P13797 630 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PAGE5Q96GU1 130 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 WDR91A4D1P6 747 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 MX2P20592 715 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 LIG3P49916 1009 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PRPF3O43395 683 aaKnown RBP12.3□□□□□ -0.44
TNC-201ENST00000341037 KRT33BQ14525 404 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 ZNF449Q6P9G9 518 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PIGBQ92521 554 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PCDHA13Q9Y5I0 950 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
TNC-201ENST00000341037 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 EIF4A3P38919 411 aaKnown RBP12.29□□□□□ -0.44
TNC-201ENST00000341037 INPP1P49441 399 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 PEX3P56589 373 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 ZNF713Q8N859 430 aaPredicted RBP12.29□□□□□ -0.44
TNC-201ENST00000341037 OR6B3Q8NGW1 331 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 Q9H521 79 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 HIP1RO75146 1068 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 PIGOQ8TEQ8 1089 aa12.29□□□□□ -0.44
TNC-201ENST00000341037 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms