RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.22
ATXN3-201ENST00000340660 TOP1MTQ969P6 601 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 ITPKCQ96DU7 683 aa13.65□□□□□ -0.22
ATXN3-201ENST00000340660 MAGEB6P1A0A0J9YX57 407 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 E9PSI1 815 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 UPP2O95045 317 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 CKBP12277 381 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 SHMT1P34896 483 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 PTGISQ16647 500 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 ATP8B4Q8TF62 1192 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 MAP4K5Q9Y4K4 846 aa13.64□□□□□ -0.23
ATXN3-201ENST00000340660 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.64□□□□□ -0.23
ATXN3-201ENST00000340660 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
ATXN3-201ENST00000340660 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
ATXN3-201ENST00000340660 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
ATXN3-201ENST00000340660 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
ATXN3-201ENST00000340660 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
ATXN3-201ENST00000340660 SERPINB13Q9UIV8 391 aa13.63□□□□□ -0.23
ATXN3-201ENST00000340660 PLAGL2Q9UPG8 496 aa13.63□□□□□ -0.23
ATXN3-201ENST00000340660 AKAP13Q12802 2813 aa13.63□□□□□ -0.23
ATXN3-201ENST00000340660 MYO18BQ8IUG5 2567 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.62□□□□□ -0.23
ATXN3-201ENST00000340660 WDR46O15213 610 aaKnown RBP13.62□□□□□ -0.23
ATXN3-201ENST00000340660 WIPF1O43516 503 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 CNTN2Q02246 1040 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 SIX5Q8N196 739 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 FIBCD1Q8N539 461 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 APOL5Q9BWW9 433 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 TEX13BQ9BXU2 312 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
ATXN3-201ENST00000340660 FSHRP23945 695 aa13.61□□□□□ -0.23
ATXN3-201ENST00000340660 RFX5P48382 616 aaPredicted RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 RBM25P49756 843 aaKnown RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 IQSEC1Q6DN90 963 aa13.61□□□□□ -0.23
ATXN3-201ENST00000340660 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 SIAH1Q8IUQ4 282 aa13.61□□□□□ -0.23
ATXN3-201ENST00000340660 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 SECISBP2LQ93073 1101 aaKnown RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 EHD4Q9H223 541 aa13.61□□□□□ -0.23
ATXN3-201ENST00000340660 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
ATXN3-201ENST00000340660 NXF1Q9UBU9 619 aaKnown RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
ATXN3-201ENST00000340660 NR6A1Q15406 480 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 SYCE2Q6PIF2 218 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 VASH1Q7L8A9 365 aaPredicted RBP13.6□□□□□ -0.23
ATXN3-201ENST00000340660 EEPD1Q7L9B9 569 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 CLEC10AQ8IUN9 316 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 C1orf210Q8IVY1 113 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 ANKRD35Q8N283 1001 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
ATXN3-201ENST00000340660 BBC3Q96PG8 261 aaPredicted RBP13.6□□□□□ -0.23
ATXN3-201ENST00000340660 TEP1Q99973 2627 aaKnown RBP13.6□□□□□ -0.23
ATXN3-201ENST00000340660 NOL10Q9BSC4 688 aaKnown RBP13.6□□□□□ -0.23
ATXN3-201ENST00000340660 VCPKMTQ9H867 229 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 FKBPLQ9UIM3 349 aa13.6□□□□□ -0.23
ATXN3-201ENST00000340660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.59□□□□□ -0.23
ATXN3-201ENST00000340660 PER2O15055 1255 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 BAG3O95817 575 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 IFIH1Q9BYX4 1025 aaKnown RBP13.59□□□□□ -0.23
ATXN3-201ENST00000340660 DLGAP2Q9P1A6 1054 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 RWDD3Q9Y3V2 267 aa13.59□□□□□ -0.23
ATXN3-201ENST00000340660 CACNA1IQ9P0X4 2223 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 ITGB1P05556 798 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
ATXN3-201ENST00000340660 CPT1AP50416 773 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TBC1D8BQ0IIM8 1120 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TWISTNBQ3B726 338 aaPredicted RBP13.58□□□□□ -0.24
ATXN3-201ENST00000340660 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 ZNF618Q5T7W0 954 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 WNT8BQ93098 351 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
ATXN3-201ENST00000340660 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TLE6Q9H808 572 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 CACNA2D2Q9NY47 1150 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 TMX2Q9Y320 296 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 ZNF462Q96JM2 2506 aa13.58□□□□□ -0.24
ATXN3-201ENST00000340660 MPHOSPH10O00566 681 aaKnown RBP13.57□□□□□ -0.24
ATXN3-201ENST00000340660 AP1G2O75843 785 aa13.57□□□□□ -0.24
ATXN3-201ENST00000340660 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
ATXN3-201ENST00000340660 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
ATXN3-201ENST00000340660 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
ATXN3-201ENST00000340660 DUSP28Q4G0W2 176 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms