RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ZBTB39O15060 712 aa23.64■■□□□ 1.38
VRK2-201ENST00000340157 TPH2Q8IWU9 490 aa23.64■■□□□ 1.38
VRK2-201ENST00000340157 BRI3BPQ8WY22 251 aa23.64■■□□□ 1.38
VRK2-201ENST00000340157 CCDC47Q96A33 483 aaKnown RBP23.64■■□□□ 1.38
VRK2-201ENST00000340157 GPRASP2Q96D09 838 aa23.64■■□□□ 1.38
VRK2-201ENST00000340157 TRIM49BA6NDI0 452 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 PTMAP06454 111 aaKnown RBP23.64■■□□□ 1.37
VRK2-201ENST00000340157 IDEP14735 1019 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 COASYQ13057 564 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 COBLL1Q53SF7 1204 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 CDKAL1Q5VV42 579 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.64■■□□□ 1.37
VRK2-201ENST00000340157 DNERQ8NFT8 737 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 SLC39A2Q9NP94 309 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 NRBP1Q9UHY1 535 aa23.64■■□□□ 1.37
VRK2-201ENST00000340157 BTBD19C9JJ37 291 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 EYA4O95677 639 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 CETPP11597 493 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 GTF2A2P52657 109 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 CACNB1Q02641 598 aaPredicted RBP23.63■■□□□ 1.37
VRK2-201ENST00000340157 PIGOQ8TEQ8 1089 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 BHMT2Q9H2M3 363 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 TBC1D22BQ9NU19 505 aa23.63■■□□□ 1.37
VRK2-201ENST00000340157 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.63■■□□□ 1.37
VRK2-201ENST00000340157 CCL15-CCL14A0A0B4J2E2 113 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 FRMD3A2A2Y4 597 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 SOWAHBA6NEL2 793 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 SLC25A27O95847 323 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 CCNE2O96020 404 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 ALDH5A1P51649 535 aaPredicted RBP23.62■■□□□ 1.37
VRK2-201ENST00000340157 CCL15Q16663 113 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 SPRYD7Q5W111 196 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 MIER3Q7Z3K6 550 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 KCTD17Q8N5Z5 321 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 FAM133AQ8N9E0 248 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 BANK1Q8NDB2 785 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 GLIS3Q8NEA6 775 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 NAP1L5Q96NT1 182 aaPredicted RBP23.62■■□□□ 1.37
VRK2-201ENST00000340157 IWS1Q96ST2 819 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 LXNQ9BS40 222 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 RUSC1Q9BVN2 902 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 INTS13Q9NVM9 706 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 PDHXO00330 501 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 KCNA2P16389 499 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 MUTP22033 750 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 RAD51AP2Q09MP3 1159 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 CCDC144BQ3MJ40 725 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 APTXQ7Z2E3 356 aaKnown RBP23.62■■□□□ 1.37
VRK2-201ENST00000340157 BCAS3Q9H6U6 928 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 PANK4Q9NVE7 773 aa23.62■■□□□ 1.37
VRK2-201ENST00000340157 ERVK-9P63128 1117 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 ERVK-24P63145 666 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 GIT2Q14161 759 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 FGD4Q96M96 766 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 FGFBP2Q9BYJ0 223 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 PCDHA2Q9Y5H9 948 aa23.61■■□□□ 1.37
VRK2-201ENST00000340157 MCM3APO60318 1980 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 CHADLQ6NUI6 762 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 TTI2Q6NXR4 508 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 NLRX1Q86UT6 975 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 NEK9Q8TD19 979 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 DHTKD1Q96HY7 919 aaPredicted RBP23.6■■□□□ 1.37
VRK2-201ENST00000340157 BMP2KQ9NSY1 1161 aaPredicted RBP23.6■■□□□ 1.37
VRK2-201ENST00000340157 PNMA3Q9UL41 463 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 SLC45A1Q9Y2W3 748 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 POTEB2H3BUK9 544 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 PSMA7O14818 248 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 MAFGO15525 162 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 STAM2O75886 525 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 SERPINC1P01008 464 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 EDNRBP24530 442 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 UBASH3AP57075 661 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 DRC7Q8IY82 874 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 FAM43AQ8N2R8 423 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 REEP2Q9BRK0 252 aa23.6■■□□□ 1.37
VRK2-201ENST00000340157 GTPBP4Q9BZE4 634 aaKnown RBP23.6■■□□□ 1.37
VRK2-201ENST00000340157 ZBTB48P10074 688 aaPredicted RBP23.59■■□□□ 1.37
VRK2-201ENST00000340157 PSMD2Q13200 908 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 STIM1Q13586 685 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 RINT1Q6NUQ1 792 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 ZNF830Q96NB3 372 aaPredicted RBP23.59■■□□□ 1.37
VRK2-201ENST00000340157 PTPN18Q99952 460 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 DUSP9Q99956 384 aaKnown RBP23.59■■□□□ 1.37
VRK2-201ENST00000340157 PORCNQ9H237 461 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 TELO2Q9Y4R8 837 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 PLXNB2O15031 1838 aa23.59■■□□□ 1.37
VRK2-201ENST00000340157 SPATA31C2B4DYI2 1134 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 P4HBP07237 508 aaKnown RBP23.58■■□□□ 1.37
VRK2-201ENST00000340157 PTGS1P23219 599 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 COPB2P35606 906 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 UGCGQ16739 394 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 ANKRD23Q86SG2 305 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 IRF2BP1Q8IU81 584 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 P2RX5Q93086 422 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 NACC1Q96RE7 527 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 SEMA6BQ9H3T3 888 aa23.58■■□□□ 1.37
VRK2-201ENST00000340157 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.58■■□□□ 1.37
VRK2-201ENST00000340157 DNAJC25-GNG10A0A024R161 153 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 PGK2P07205 417 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 CCNE1P24864 410 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms