RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 KIAA1683Q9H0B3 1180 aa17.16■□□□□ 0.34
MBD1-203ENST00000339998 TRIM10Q9UDY6 481 aa17.16■□□□□ 0.34
MBD1-203ENST00000339998 CENPFP49454 3210 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 TBX3O15119 743 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 TFRCP02786 760 aaKnown RBP17.15■□□□□ 0.34
MBD1-203ENST00000339998 WDR59Q6PJI9 974 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 TMEM150BA6NC51 233 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
MBD1-203ENST00000339998 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
MBD1-203ENST00000339998 CCDC65Q8IXS2 484 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 CRACR2AQ9BSW2 395 aa17.15■□□□□ 0.34
MBD1-203ENST00000339998 ZSCAN12O43309 604 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 SORBS3O60504 671 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 URI1O94763 535 aaPredicted RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 TPM1P09493 284 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 MYCLP12524 364 aaPredicted RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 HOXD13P35453 343 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 DNM2P50570 870 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 CCDC125Q86Z20 511 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 SLC38A10Q9HBR0 1119 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 LUC7L2Q9Y383 392 aaKnown RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 IPO5O00410 1097 aaKnown RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
MBD1-203ENST00000339998 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.33
MBD1-203ENST00000339998 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
MBD1-203ENST00000339998 PLEKP08567 350 aaPredicted RBP17.13■□□□□ 0.33
MBD1-203ENST00000339998 PTPRAP18433 802 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 CCDC175P0C221 793 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
MBD1-203ENST00000339998 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 PPP1R9AQ9ULJ8 1098 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 PLA2G6O60733 806 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 VWA3BQ502W6 1294 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 ZC2HC1CQ53FD0 456 aaPredicted RBP17.13■□□□□ 0.33
MBD1-203ENST00000339998 RINT1Q6NUQ1 792 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
MBD1-203ENST00000339998 CLIC2O15247 247 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
MBD1-203ENST00000339998 HSD17B4P51659 736 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 BACE1P56817 501 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
MBD1-203ENST00000339998 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-203ENST00000339998 TRERF1Q96PN7 1200 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 TTYH3Q9C0H2 523 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 REXO2Q9Y3B8 237 aaKnown RBP17.12■□□□□ 0.33
MBD1-203ENST00000339998 ATP9AO75110 1047 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
MBD1-203ENST00000339998 PLS1Q14651 629 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 SCYL3Q8IZE3 742 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 MXRA8Q9BRK3 442 aa17.12■□□□□ 0.33
MBD1-203ENST00000339998 PSMD2Q13200 908 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 CCDC40Q4G0X9 1142 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 LPAR1Q92633 364 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
MBD1-203ENST00000339998 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
MBD1-203ENST00000339998 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 VWA5AO00534 786 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 MCTP2Q6DN12 878 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 SAMM50Q9Y512 469 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
MBD1-203ENST00000339998 GCNT3O95395 438 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 TSG101Q99816 390 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 LXNQ9BS40 222 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
MBD1-203ENST00000339998 ADAM9Q13443 819 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
MBD1-203ENST00000339998 ELF2Q15723 593 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
MBD1-203ENST00000339998 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 EYA4O95677 639 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 CASP4P49662 377 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 SEMA3FQ13275 785 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 COG2Q14746 738 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 ERCC6LQ2NKX8 1250 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms