RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 SLC5A9Q2M3M2 681 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ANKRD20A2Q5SQ80 823 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ANKRD20A1Q5TYW2 823 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ANKRD20A3Q5VUR7 823 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 LDHAL6AQ6ZMR3 332 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 DTHD1Q6ZMT9 781 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ANKS1AQ92625 1134 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 PLA2G12BQ9BX93 195 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 CNTNAP5Q8WYK1 1306 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 PCDH11XQ9BZA7 1347 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 PCDH11YQ9BZA8 1340 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 A8MUI8 341 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 UBA7P41226 1012 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 RPS6KA1Q15418 735 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 HPS3Q969F9 1004 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-201ENST00000339754 C7orf25Q9BPX7 421 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 PACSIN1Q9BY11 444 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 CCDC134Q9H6E4 229 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 BCORQ6W2J9 1755 aa10.28□□□□□ -0.76
NECAP1-201ENST00000339754 IGF2BP3O00425 579 aaKnown RBP eCLIP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 PPFIA2O75334 1257 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 KIF4AO95239 1232 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 SERPING1P05155 500 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 UQCRFS1P1P0C7P4 283 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 GNAT2P19087 354 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ATP4AP20648 1035 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 PPP1R2P41236 205 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 EIF3BP55884 814 aaKnown RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 MAP3K12Q12852 859 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 IFI16Q16666 785 aaKnown RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 TDRD12Q587J7 1177 aaKnown RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 CACNA2D4Q7Z3S7 1137 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ESR2Q92731 530 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 TAF4BQ92750 862 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 BORCS6Q96GS4 357 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 PBKQ96KB5 322 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 MOV10L1Q9BXT6 1211 aaKnown RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 DDX47Q9H0S4 455 aaKnown RBP10.27□□□□□ -0.76
NECAP1-201ENST00000339754 EPB41L4BQ9H329 900 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ECT2Q9H8V3 914 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ADAM22Q9P0K1 906 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 ABCA3Q99758 1704 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 PNPLA7Q6ZV29 1317 aa10.27□□□□□ -0.76
NECAP1-201ENST00000339754 BAZ2BQ9UIF8 2168 aaKnown RBP10.27□□□□□ -0.77
NECAP1-201ENST00000339754 A0A087X0T9 212 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 CEP104O60308 925 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 NOL4O94818 638 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 UPP2O95045 317 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 PDE8BO95263 885 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SHBGP04278 402 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 KRT16P08779 473 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 FAM228BP0C875 321 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SCG2P13521 617 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 USP11P51784 963 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SLC18A3Q16572 532 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 KIAA0753Q2KHM9 967 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 CWF19L1Q69YN2 538 aaKnown RBP10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SLC30A9Q6PML9 568 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SPATA5Q8NB90 893 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 TBC1D5Q92609 795 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 ITFG2Q969R8 447 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 FAM167BQ9BTA0 163 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 SAMD15Q9P1V8 674 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 AMACRQ9UHK6 382 aa10.27□□□□□ -0.77
NECAP1-201ENST00000339754 DPPA5A6NC42 116 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 STXBP3O00186 592 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
NECAP1-201ENST00000339754 ITGA4P13612 1032 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 BNIP1Q12981 228 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SPDYCQ5MJ68 293 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SFMBT2Q5VUG0 894 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-201ENST00000339754 ARHGAP27Q6ZUM4 889 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SYNE4Q8N205 404 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 ABCB11O95342 1321 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 FLT1P17948 1338 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 EVI5O60447 810 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 SNX3O60493 162 aa10.26□□□□□ -0.77
NECAP1-201ENST00000339754 RTN3O95197 1032 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms