RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MAEAQ7L5Y9 396 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 APOBEC3FQ8IUX4 373 aaKnown RBP8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 SYT2Q8N9I0 419 aaPredicted RBP8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 SLC5A5Q92911 643 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 CHP1Q99653 195 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 THAP9Q9H5L6 903 aa8.23□□□□□ -1.09
SRFBP1-201ENST00000339397 KDM3AQ9Y4C1 1321 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 LGALS16A8MUM7 142 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 EPHB6O15197 1021 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 DHX15O43143 795 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 MFAP3LO75121 409 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 MYBP10242 640 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 ERVK-24P63145 666 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 RBM10P98175 930 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 PLS1Q14651 629 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 TREML2Q5T2D2 321 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 C9orf131Q5VYM1 1079 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 LRRC55Q6ZSA7 311 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 SFR1Q86XK3 245 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 GUF1Q8N442 669 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 CCDC47Q96A33 483 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 CLMNQ96JQ2 1002 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 BMP2KQ9NSY1 1161 aaPredicted RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 TFR2Q9UP52 801 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 AFG3L2Q9Y4W6 797 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 PRPF6O94906 941 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 MTIF2P46199 727 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 TBC1D8BQ0IIM8 1120 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 SYCP1Q15431 976 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 HAUS3Q68CZ6 603 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 SNRNP48Q6IEG0 339 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 RINT1Q6NUQ1 792 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 REPS2Q8NFH8 660 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 RMDN3Q96TC7 470 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 NOC4LQ9BVI4 516 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 MRPL44Q9H9J2 332 aaKnown RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 ZNF214Q9UL59 606 aaPredicted RBP8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 PPP2R2CQ9Y2T4 447 aa8.22□□□□□ -1.09
SRFBP1-201ENST00000339397 TRAF5O00463 557 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 STX10O60499 249 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 KRT9P35527 623 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 PPP2R5CQ13362 524 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 PGM5Q15124 567 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 TKFCQ3LXA3 575 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 ZCWPW2Q504Y3 356 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 ZC2HC1CQ53FD0 456 aaPredicted RBP8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 MCTP2Q6DN12 878 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 TRIM65Q6PJ69 517 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 B3GNT9Q6UX72 402 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 MYRIPQ8NFW9 859 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 ERMNQ8TAM6 284 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 KCTD10Q9H3F6 313 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 RNF146Q9NTX7 359 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 RABGAP1Q9Y3P9 1069 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 SBF1O95248 1867 aa8.21□□□□□ -1.09
SRFBP1-201ENST00000339397 BICDL2A1A5D9 508 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 FRMD3A2A2Y4 597 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 ARHGAP6O43182 974 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 ZBED4O75132 1171 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 EEF1GP26641 437 aaKnown RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 NMT1P30419 496 aaKnown RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 USP14P54578 494 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 SPAG1Q07617 926 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 RNF207Q6ZRF8 634 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 LXNQ9BS40 222 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 ABHD10Q9NUJ1 306 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 MAGEC2Q9UBF1 373 aaPredicted RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 CTDP1Q9Y5B0 961 aaPredicted RBP8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 SNCAIPQ9Y6H5 919 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 RPTORQ8N122 1335 aa8.21□□□□□ -1.1
SRFBP1-201ENST00000339397 IRF6O14896 467 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 DSG3P32926 999 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 COG2Q14746 738 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 COBLL1Q53SF7 1204 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 WDR59Q6PJI9 974 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CATSPERGQ6ZRH7 1159 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 KRT26Q7Z3Y9 468 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 CCDC65Q8IXS2 484 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 ANKRD20A12PQ8NF67 263 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 SMCR8Q8TEV9 937 aaPredicted RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 WDR24Q96S15 920 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 PDCD2LQ9BRP1 358 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 LZTFL1Q9NQ48 299 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 PXMP2Q9NR77 195 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 RGS20O76081 388 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 EYA4O95677 639 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 SP4Q02446 784 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 TRAF1Q13077 416 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 PSMD2Q13200 908 aa8.2□□□□□ -1.1
SRFBP1-201ENST00000339397 MTMR1Q13613 665 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms