RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PXMP2Q9NR77 195 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 R3HCC1Q9Y3T6 440 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 UBIAD1Q9Y5Z9 338 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 MTMR1Q13613 665 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 GIT2Q14161 759 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 SH3D19Q5HYK7 790 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 TC2NQ8N9U0 490 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 PDCD2LQ9BRP1 358 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 RUSC1Q9BVN2 902 aa24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 MAP3K20Q9NYL2 800 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 MAGEC2Q9UBF1 373 aaPredicted RBP24.94■■□□□ 1.58
PDLIM2-203ENST00000339162 IRF6O14896 467 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 IREB2P48200 963 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 ITGB3BPQ13352 177 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 BANK1Q8NDB2 785 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 RBM46Q8TBY0 533 aaKnown RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 C16orf45Q96MC5 204 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 HOXC10Q9NYD6 342 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 PNMA2Q9UL42 364 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 PCDHA2Q9Y5H9 948 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 RBL2Q08999 1139 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 USP50Q70EL3 339 aaPredicted RBP24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 TEX13BQ9BXU2 312 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 JADE2Q9NQC1 790 aa24.93■■□□□ 1.58
PDLIM2-203ENST00000339162 RSPH10B2B2RC85 870 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 RSPH10BP0C881 870 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 EEF1GP26641 437 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 UBXN1Q04323 297 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 B3GNT9Q6UX72 402 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 MYOCDQ8IZQ8 938 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 CNOT6LQ96LI5 555 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 RIT2Q99578 217 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 AGO4Q9HCK5 861 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 TUFT1Q9NNX1 390 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 TESPA1A2RU30 521 aaPredicted RBP24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 DHX15O43143 795 aaKnown RBP24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 EYA4O95677 639 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 BCRP11274 1271 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 OAZ1P54368 228 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 GADL1Q6ZQY3 521 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 NELFCDQ8IXH7 590 aa24.92■■□□□ 1.58
PDLIM2-203ENST00000339162 FRMPD4Q14CM0 1322 aa24.91■■□□□ 1.58
PDLIM2-203ENST00000339162 ERCC3P19447 782 aa24.91■■□□□ 1.58
PDLIM2-203ENST00000339162 NOC3LQ8WTT2 800 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-203ENST00000339162 TMX1Q9H3N1 280 aa24.91■■□□□ 1.58
PDLIM2-203ENST00000339162 OTOFQ9HC10 1997 aa24.91■■□□□ 1.58
PDLIM2-203ENST00000339162 ATP9AO75110 1047 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 E4F1Q66K89 784 aaPredicted RBP24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 LXNQ9BS40 222 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 TUBGCP2Q9BSJ2 902 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 WDR90Q96KV7 1748 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 FRMD3A2A2Y4 597 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 SFI1A8K8P3 1242 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 B4DLN1 442 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 CASP5P51878 434 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 EPHA7Q15375 998 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 PPFIBP1Q86W92 1011 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 TMEM139Q8IV31 216 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 SAMD3Q8N6K7 520 aa24.9■■□□□ 1.58
PDLIM2-203ENST00000339162 GLTPD2A6NH11 291 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 NRDCO43847 1150 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 CASP14P31944 242 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 RINT1Q6NUQ1 792 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 NIPA1Q7RTP0 329 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 MIER3Q7Z3K6 550 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 SFR1Q86XK3 245 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 A1CFQ9NQ94 594 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 SAMM50Q9Y512 469 aa24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 RBBP6Q7Z6E9 1792 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-203ENST00000339162 ATP2A1O14983 1001 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 GYPCP04921 128 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 NF2P35240 595 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 MTIF2P46199 727 aaKnown RBP24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 ILDR2Q71H61 639 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 CCAR2Q8N163 923 aaKnown RBP24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 SCFD1Q8WVM8 642 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 ACAD9Q9H845 621 aa24.89■■□□□ 1.57
PDLIM2-203ENST00000339162 AKR1B15C9JRZ8 316 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 NR3C2P08235 984 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 ANKRD13AQ8IZ07 590 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 BAG1Q99933 345 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 CYP39A1Q9NYL5 469 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 LGALS16A8MUM7 142 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 FXR1P51114 621 aaKnown RBP eCLIP24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 MB21D1Q8N884 522 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 CCDC112Q8NEF3 446 aa24.88■■□□□ 1.57
PDLIM2-203ENST00000339162 RNF225M0QZC1 329 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 LRRC63Q05C16 580 aa24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 TRMT1LQ7Z2T5 733 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 FAM114A1Q8IWE2 563 aa24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 ZC3H15Q8WU90 426 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 TAF1DQ9H5J8 278 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 BTBD7Q9P203 1132 aa24.87■■□□□ 1.57
PDLIM2-203ENST00000339162 PPATQ06203 517 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 VSIG10LQ86VR7 867 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 ZNF507Q8TCN5 953 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 NACC1Q96RE7 527 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 PTPRFP10586 1907 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 LRRC55Q6ZSA7 311 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms