RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 FILIP1LQ4L180 1135 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 KRT26Q7Z3Y9 468 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 SYT2Q8N9I0 419 aaPredicted RBP19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 TC2NQ8N9U0 490 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 DYDC2Q96IM9 177 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 KCNH7Q9NS40 1196 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 RNF146Q9NTX7 359 aa19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
ATAD3A-201ENST00000339113 PARP14Q460N5 1801 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 PSMD2Q13200 908 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 SNRNP48Q6IEG0 339 aaKnown RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 B3GNT9Q6UX72 402 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 GUF1Q8N442 669 aaKnown RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 PIGOQ8TEQ8 1089 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 PCDHA2Q9Y5H9 948 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 BICDL2A1A5D9 508 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 BAATQ14032 418 aaPredicted RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 NAA30Q147X3 362 aaPredicted RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 TMEM139Q8IV31 216 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 TPH2Q8IWU9 490 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 BHMT2Q9H2M3 363 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 BCAS3Q9H6U6 928 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 POLD4Q9HCU8 107 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 TRMT1Q9NXH9 659 aaKnown RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 WRAP73Q9P2S5 460 aaPredicted RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 ZNF215Q9UL58 517 aaPredicted RBP19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 UBIAD1Q9Y5Z9 338 aa19.05■□□□□ 0.64
ATAD3A-201ENST00000339113 PPP1R2P41236 205 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 FAM193AP78312 1265 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 GIT2Q14161 759 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 TKFCQ3LXA3 575 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 FAM26FQ5R3K3 315 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 PCNX4Q63HM2 1172 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 MOB2Q70IA6 237 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 MAP3K20Q9NYL2 800 aaKnown RBP19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 STK24Q9Y6E0 443 aa19.04■□□□□ 0.64
ATAD3A-201ENST00000339113 DDX39AO00148 427 aaKnown RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 RBL2Q08999 1139 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 PGM5Q15124 567 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 HERC4Q5GLZ8 1057 aaPredicted RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 SH3D19Q5HYK7 790 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 TREML2Q5T2D2 321 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 E4F1Q66K89 784 aaPredicted RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 ZNF592Q92610 1267 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 RMDN3Q96TC7 470 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 RABGAP1Q9Y3P9 1069 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 FRMD3A2A2Y4 597 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 SPDYE16A6NNV3 312 aaPredicted RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 DHX15O43143 795 aaKnown RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 PEX10O60683 326 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 KRT18P05783 430 aaKnown RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 EEF1GP26641 437 aaKnown RBP19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 CCDC65Q8IXS2 484 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 ANKRD20A12PQ8NF67 263 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 CPLX3Q8WVH0 158 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 RUSC1Q9BVN2 902 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
ATAD3A-201ENST00000339113 PPP1R12BO60237 982 aaPredicted RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 BCRP11274 1271 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 ITGB3BPQ13352 177 aaPredicted RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 KRT222Q8N1A0 295 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 NOC3LQ8WTT2 800 aaKnown RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 CLMNQ96JQ2 1002 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 REEP2Q9BRK0 252 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 PDCD2LQ9BRP1 358 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 TEKT3Q9BXF9 490 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 ZHX3Q9H4I2 956 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 L2HGDHQ9H9P8 463 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 TUFT1Q9NNX1 390 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 PXMP2Q9NR77 195 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 SLU7O95391 586 aaKnown RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 EYA4O95677 639 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 CNOT6LQ96LI5 555 aaKnown RBP19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 RIT2Q99578 217 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 JADE2Q9NQC1 790 aa19.02■□□□□ 0.64
ATAD3A-201ENST00000339113 COL11A1P12107 1806 aaPredicted RBP19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 RSPH10B2B2RC85 870 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 RNF225M0QZC1 329 aaPredicted RBP19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 RSPH10BP0C881 870 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 OAZ1P54368 228 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 UBXN1Q04323 297 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 MYOCDQ8IZQ8 938 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 SAMD3Q8N6K7 520 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 ZNF507Q8TCN5 953 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 L3MBTL3Q96JM7 780 aaPredicted RBP19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 AGO4Q9HCK5 861 aaKnown RBP19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 GYPCP04921 128 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 EPHX2P34913 555 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 EPHA7Q15375 998 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 NIPA1Q7RTP0 329 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 RBM46Q8TBY0 533 aaKnown RBP19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 TUBGCP2Q9BSJ2 902 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 ELP3Q9H9T3 547 aa19.01■□□□□ 0.63
ATAD3A-201ENST00000339113 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms