RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 LSM14BQ9BX40 385 aaKnown RBP22.31■■□□□ 1.16
RUNX3-202ENST00000338888 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 MYH3P11055 1940 aa22.31■■□□□ 1.16
RUNX3-202ENST00000338888 BUB1BO60566 1050 aaPredicted RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 RCSD1Q6JBY9 416 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 SV2BQ7L1I2 683 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 DNAAF5Q86Y56 855 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 TBC1D22AQ8WUA7 517 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 THOC1Q96FV9 657 aaKnown RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 PSMD1Q99460 953 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 MMTAG2Q9BU76 263 aaKnown RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 AMACRQ9UHK6 382 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 KIF4AO95239 1232 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 CYP2D6P10635 497 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 PCP11498 1178 aaKnown RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 TMED8Q6PL24 325 aaPredicted RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 RSRC1Q96IZ7 334 aaKnown RBP22.3■■□□□ 1.16
RUNX3-202ENST00000338888 KANSL2Q9H9L4 492 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 SPATA31A5Q5VU36 1347 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 SPATA31A7Q8IWB4 1347 aa22.3■■□□□ 1.16
RUNX3-202ENST00000338888 CTNND1O60716 968 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 ABCB11O95342 1321 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 CLTAP09496 248 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 GYG1P46976 350 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 DHX9Q08211 1270 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 MYO1EQ12965 1108 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 MTMR3Q13615 1198 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 PNMA8AQ86V59 439 aaPredicted RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 TAX1BP1Q86VP1 789 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 FAM133AQ8N9E0 248 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 CCDC197Q8NCU1 140 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 XPO6Q96QU8 1125 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 KLHL30Q0D2K2 578 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 FAM98CQ17RN3 349 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 GUF1Q8N442 669 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 NSMCE1Q8WV22 266 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 CALML4Q96GE6 196 aa22.29■■□□□ 1.16
RUNX3-202ENST00000338888 CDCA7Q9BWT1 371 aaPredicted RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 THRAP3Q9Y2W1 955 aaKnown RBP22.29■■□□□ 1.16
RUNX3-202ENST00000338888 ITGA4P13612 1032 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 UNC13DQ70J99 1090 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 TMC3Q7Z5M5 1100 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 SWAP70Q9UH65 585 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 ARAP2Q8WZ64 1704 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 WTIPA6NIX2 430 aaPredicted RBP22.28■■□□□ 1.16
RUNX3-202ENST00000338888 LRRC63Q05C16 580 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 ERMARDQ5T6L9 678 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 CCDC63Q8NA47 563 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 SYN2Q92777 582 aaPredicted RBP22.28■■□□□ 1.16
RUNX3-202ENST00000338888 NUCKS1Q9H1E3 243 aaKnown RBP22.28■■□□□ 1.16
RUNX3-202ENST00000338888 DPH5Q9H2P9 285 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 L3MBTL1Q9Y468 752 aa22.28■■□□□ 1.16
RUNX3-202ENST00000338888 KRIT1O00522 736 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 TBC1D1Q86TI0 1168 aaPredicted RBP22.27■■□□□ 1.16
RUNX3-202ENST00000338888 BLOC1S4Q9NUP1 217 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 F8VZ95 297 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 USP11P51784 963 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 CHRNDQ07001 517 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 ACTRT1Q8TDG2 376 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 ZNF384Q8TF68 577 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 PBKQ96KB5 322 aa22.27■■□□□ 1.16
RUNX3-202ENST00000338888 NOC2LQ9Y3T9 749 aaKnown RBP22.27■■□□□ 1.16
RUNX3-202ENST00000338888 TTI1O43156 1089 aa22.27■■□□□ 1.15
RUNX3-202ENST00000338888 PNMA1Q8ND90 353 aa22.27■■□□□ 1.15
RUNX3-202ENST00000338888 CELF4Q9BZC1 486 aaKnown RBP22.27■■□□□ 1.15
RUNX3-202ENST00000338888 FAM129AQ9BZQ8 928 aa22.27■■□□□ 1.15
RUNX3-202ENST00000338888 PGRMC1O00264 195 aaKnown RBP22.26■■□□□ 1.15
RUNX3-202ENST00000338888 TXKP42681 527 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 METTL13Q8N6R0 699 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 HOOK2Q96ED9 719 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 TSG101Q99816 390 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 TRIM31Q9BZY9 425 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 ATP8A1Q9Y2Q0 1164 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 STXBP3O00186 592 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 TRAF5O00463 557 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 CES2O00748 559 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 CYTH3O43739 400 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 CAND2O75155 1236 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 IGHMBP2P38935 993 aaKnown RBP22.26■■□□□ 1.15
RUNX3-202ENST00000338888 CCNHP51946 323 aaPredicted RBP22.26■■□□□ 1.15
RUNX3-202ENST00000338888 SLC8A3P57103 927 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 GRB10Q13322 594 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 ANKS4BQ8N8V4 417 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 COL4A3BPQ9Y5P4 624 aa22.26■■□□□ 1.15
RUNX3-202ENST00000338888 MYH7BA7E2Y1 1941 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 PVALEFA0A1B0GWK0 134 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 BHMG1C9JSJ3 638 aaPredicted RBP22.25■■□□□ 1.15
RUNX3-202ENST00000338888 FAM133BQ5BKY9 247 aaKnown RBP22.25■■□□□ 1.15
RUNX3-202ENST00000338888 MAB21L3Q8N8X9 362 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 DAGLBQ8NCG7 672 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.25■■□□□ 1.15
RUNX3-202ENST00000338888 CNOT10Q9H9A5 744 aaKnown RBP22.25■■□□□ 1.15
RUNX3-202ENST00000338888 EBF2Q9HAK2 575 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 KCNQ2O43526 872 aa22.25■■□□□ 1.15
RUNX3-202ENST00000338888 ANP32DO95626 131 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms