RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
CBX3-201ENST00000337620 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 CPA4Q9UI42 421 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 IVNS1ABPQ9Y6Y0 642 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 SPATA31C2B4DYI2 1134 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 KLRC4O43908 158 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 EDNRBP24530 442 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 EEPD1Q7L9B9 569 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 SMYD4Q8IYR2 804 aaPredicted RBP16.42■□□□□ 0.22
CBX3-201ENST00000337620 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 SORBS3O60504 671 aa16.41■□□□□ 0.22
CBX3-201ENST00000337620 KCNA2P16389 499 aa16.41■□□□□ 0.22
CBX3-201ENST00000337620 DDX12PQ92771 950 aa16.41■□□□□ 0.22
CBX3-201ENST00000337620 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
CBX3-201ENST00000337620 FGD4Q96M96 766 aa16.41■□□□□ 0.22
CBX3-201ENST00000337620 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
CBX3-201ENST00000337620 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
CBX3-201ENST00000337620 ZNFX1Q9P2E3 1918 aaKnown RBP16.4■□□□□ 0.22
CBX3-201ENST00000337620 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
CBX3-201ENST00000337620 ADORA2AP29274 412 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 KRT76Q01546 638 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 KCNB1Q14721 858 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 ZNF658Q5TYW1 1059 aaPredicted RBP16.4■□□□□ 0.22
CBX3-201ENST00000337620 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 PIGOQ8TEQ8 1089 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 LXNQ9BS40 222 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 BCAS3Q9H6U6 928 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
CBX3-201ENST00000337620 STRNO43815 780 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 CCNE2O96020 404 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 IDEP14735 1019 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 SREBF2Q12772 1141 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 KLHL10Q6JEL2 608 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 BHMT2Q9H2M3 363 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
CBX3-201ENST00000337620 WRAP73Q9P2S5 460 aaPredicted RBP16.4■□□□□ 0.22
CBX3-201ENST00000337620 SMTNL1A8MU46 457 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 WDR64B1ANS9 1081 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 ZBTB39O15060 712 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 P4HBP07237 508 aaKnown RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 ICAM3P32942 547 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 JAK3P52333 1124 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 SP2Q02086 613 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 SP4Q02446 784 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 CYP4F22Q6NT55 531 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 ZIC5Q96T25 663 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 GDAQ9Y2T3 454 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 COBLO75128 1261 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 EYA4O95677 639 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 CD44P16070 742 aaKnown RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 MUTP22033 750 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 MAPK4P31152 587 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 SFNP31947 248 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 ABRAQ8N0Z2 381 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 NACC1Q96RE7 527 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 JPH1Q9HDC5 661 aaPredicted RBP16.39■□□□□ 0.21
CBX3-201ENST00000337620 NFASCO94856 1347 aa16.39■□□□□ 0.21
CBX3-201ENST00000337620 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 CYP11B2P19099 503 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 PLEKHH3Q7Z736 793 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 DPP9Q86TI2 863 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 SLC9A2Q9UBY0 812 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 MAPK8IP1Q9UQF2 711 aa16.38■□□□□ 0.21
CBX3-201ENST00000337620 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ASB14A6NK59 587 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
CBX3-201ENST00000337620 MYL5Q02045 173 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ZNF792Q3KQV3 632 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 DNAJC19Q96DA6 116 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ZFYVE28Q9HCC9 887 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 ADGRA2Q96PE1 1338 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 PLXNB2O15031 1838 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 IKBKBO14920 756 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 AP5Z1O43299 807 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 TLR2O60603 784 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 TPM4P67936 248 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
CBX3-201ENST00000337620 NCAPHQ15003 741 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 CNNM4Q6P4Q7 775 aa16.37■□□□□ 0.21
CBX3-201ENST00000337620 TRMT44Q8IYL2 757 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms