RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RPAP3Q9H6T3 665 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-201ENST00000336180 VAV3Q9UKW4 847 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-201ENST00000336180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.95□□□□□ -0.18
LIMK1-201ENST00000336180 ZHX2Q9Y6X8 837 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 GREB1LQ9C091 1923 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-201ENST00000336180 BICDL2A1A5D9 508 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 CENPPQ6IPU0 288 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 WDR59Q6PJI9 974 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 TAAR1Q96RJ0 339 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
LIMK1-201ENST00000336180 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-201ENST00000336180 GCNT3O95395 438 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 ITGB5P18084 799 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 CBX1P83916 185 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 COG2Q14746 738 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 SLC35F6Q8N357 371 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 PANX2Q96RD6 677 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 UNC45AQ9H3U1 944 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 REXO2Q9Y3B8 237 aaKnown RBP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 ZNF536O15090 1300 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 SLU7O95391 586 aaKnown RBP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 VCAM1P19320 739 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 EEF1GP26641 437 aaKnown RBP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 DNA2P51530 1060 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 TGFB2P61812 414 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 GIT2Q14161 759 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 TNIP1Q15025 636 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 TCERG1LQ5VWI1 586 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 SLFN12Q8IYM2 578 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 NDST4Q9H3R1 872 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 PTPROQ16827 1216 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-201ENST00000336180 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
LIMK1-201ENST00000336180 MACROD2A1Z1Q3 448 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 TISP43B9A030 160 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-201ENST00000336180 ACTN1P12814 892 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 CASP4P49662 377 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 LRRC55Q6ZSA7 311 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 PSMB7Q99436 277 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 RABGAP1Q9Y3P9 1069 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-201ENST00000336180 CLGNO14967 610 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
LIMK1-201ENST00000336180 SLITRK3O94933 977 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-201ENST00000336180 VWA3BQ502W6 1294 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 MOB2Q70IA6 237 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 FAM83AQ86UY5 434 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 MNS1Q8NEH6 495 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 OR8K1Q8NGG5 319 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 ZBED3Q96IU2 234 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-201ENST00000336180 NT5C3AQ9H0P0 336 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
LIMK1-201ENST00000336180 CYP3A7-CYP3A51PA0A087WV96 503 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 PVALEFA0A1B0GWK0 134 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 MYL1P05976 194 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 CYP3A7P24462 503 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 DNM2P50570 870 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 SOX10P56693 466 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 HAUS3Q68CZ6 603 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 GUF1Q8N442 669 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 ERMNQ8TAM6 284 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 MRPL11Q9Y3B7 192 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 SRGAP2O75044 1071 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 HIRAP54198 1017 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 ADAM9Q13443 819 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 TSG101Q99816 390 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 LACRTQ9GZZ8 138 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 CGNQ9P2M7 1197 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 EPN1Q9Y6I3 576 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 FOSP01100 380 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 NR2F2P24468 414 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 TSR1Q2NL82 804 aaKnown RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 Q4G0T1 1027 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 CT47A1Q5JQC4 288 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-201ENST00000336180 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 FEM1BQ9UK73 627 aa13.92□□□□□ -0.18
LIMK1-201ENST00000336180 ATP9AO75110 1047 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 NDUFA10O95299 355 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms