RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 AFG1LQ8WV93 481 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 FERMT2Q96AC1 680 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 SPATA33Q96N06 139 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 PCDHA7Q9UN72 937 aa19.73■□□□□ 0.75
CHGA-202ENST00000334654 SYNRGQ9UMZ2 1314 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 MYADML2A6NDP7 307 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 A6NJR5 290 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 MYCP01106 439 aaPredicted RBP19.72■□□□□ 0.75
CHGA-202ENST00000334654 RARBP10826 455 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 HOXD8P13378 290 aaPredicted RBP19.72■□□□□ 0.75
CHGA-202ENST00000334654 SP4Q02446 784 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 KRI1Q8N9T8 703 aaKnown RBP19.72■□□□□ 0.75
CHGA-202ENST00000334654 PPTC7Q8NI37 304 aa19.72■□□□□ 0.75
CHGA-202ENST00000334654 ELP1O95163 1332 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 BRCA2P51587 3418 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 KIAA0100Q14667 2235 aaKnown RBP19.71■□□□□ 0.75
CHGA-202ENST00000334654 IGKV6D-21A0A0A0MT36 114 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 CHMP2AO43633 222 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 MSCO60682 206 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 PGK1P00558 417 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 KLHDC9Q8NEP7 349 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 SEPT1Q8WYJ6 367 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 PCYT2Q99447 389 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 RNF208Q9H0X6 261 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 CSRNP2Q9H175 543 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 DISC1Q9NRI5 854 aa19.71■□□□□ 0.75
CHGA-202ENST00000334654 PP2D1A8MPX8 630 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 CDC25AP30304 524 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 TMEM266Q2M3C6 531 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 NCAPH2Q6IBW4 605 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 CCSAPQ6IQ19 270 aaPredicted RBP19.7■□□□□ 0.74
CHGA-202ENST00000334654 USP49Q70CQ1 688 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 MMTAG2Q9BU76 263 aaKnown RBP19.7■□□□□ 0.74
CHGA-202ENST00000334654 AP5M1Q9H0R1 490 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 XPNPEP3Q9NQH7 507 aa19.7■□□□□ 0.74
CHGA-202ENST00000334654 MYH9P35579 1960 aaKnown RBP19.7■□□□□ 0.74
CHGA-202ENST00000334654 WDR64B1ANS9 1081 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 CUTAO60888 179 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 MMP3P08254 477 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 LONP1P36776 959 aaKnown RBP19.69■□□□□ 0.74
CHGA-202ENST00000334654 BEX3Q00994 111 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 EPHA7Q15375 998 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 SPECC1Q5M775 1068 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 MIER3Q7Z3K6 550 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 SMAP1Q8IYB5 467 aaPredicted RBP19.69■□□□□ 0.74
CHGA-202ENST00000334654 RDM1Q8NG50 284 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 HSD17B14Q9BPX1 270 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 LRWD1Q9UFC0 647 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 PCDHA10Q9Y5I2 948 aa19.69■□□□□ 0.74
CHGA-202ENST00000334654 PPFIA4O75335 1185 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 LGR5O75473 907 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 SUPT20HL2P0C7V6 817 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 CST5P28325 142 aaPredicted RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 SFNP31947 248 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 TCF7P36402 384 aaPredicted RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 ME1P48163 572 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 JAK3P52333 1124 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 FSCN1Q16658 493 aaKnown RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 COL13A1Q5TAT6 717 aaPredicted RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 SHC4Q6S5L8 630 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 CCDC60Q8IWA6 550 aaPredicted RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 ZNF579Q8NAF0 562 aaKnown RBP19.68■□□□□ 0.74
CHGA-202ENST00000334654 TMEM87AQ8NBN3 555 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
CHGA-202ENST00000334654 GJB1P08034 283 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 C6orf222P0C671 652 aaPredicted RBP19.67■□□□□ 0.74
CHGA-202ENST00000334654 SPATA31C1P0DKV0 1188 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 LRRC41Q15345 812 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 EPSTI1Q96J88 318 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 AK8Q96MA6 479 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 EIF2AK1Q9BQI3 630 aaKnown RBP19.67■□□□□ 0.74
CHGA-202ENST00000334654 CRISPLD2Q9H0B8 497 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 RGL1Q9NZL6 768 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 OGDHLQ9ULD0 1010 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 NOP56O00567 594 aaKnown RBP19.67■□□□□ 0.74
CHGA-202ENST00000334654 MED24O75448 989 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 SLITRK3O94933 977 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 CPT1AP50416 773 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 ECM1Q16610 540 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 UGCGQ16739 394 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 ADALQ6DHV7 355 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 SWSAP1Q6NVH7 229 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 C16orf70Q9BSU1 422 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 RAB34Q9BZG1 259 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 WRAP73Q9P2S5 460 aaPredicted RBP19.67■□□□□ 0.74
CHGA-202ENST00000334654 SAMM50Q9Y512 469 aa19.67■□□□□ 0.74
CHGA-202ENST00000334654 SGPL1O95470 568 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 LGALS2P05162 132 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 PSAPP07602 524 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 ATP4AP20648 1035 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 DGKDQ16760 1214 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 GNASQ5JWF2 1037 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 CATSPER3Q86XQ3 398 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 TRIM50Q86XT4 487 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 AFAP1L1Q8TED9 768 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 KAT2BQ92831 832 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 DYDC2Q96IM9 177 aa19.66■□□□□ 0.74
CHGA-202ENST00000334654 POLR3CQ9BUI4 534 aaPredicted RBP19.66■□□□□ 0.74
CHGA-202ENST00000334654 SPC25Q9HBM1 224 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms