RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 RNF220Q5VTB9 566 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 CDCA2Q69YH5 1023 aaPredicted RBP12.95□□□□□ -0.34
LIMK2-202ENST00000333611 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
LIMK2-202ENST00000333611 KDM7AQ6ZMT4 941 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 ALS2CR12Q96Q35 445 aa12.95□□□□□ -0.34
LIMK2-202ENST00000333611 MMADHCQ9H3L0 296 aaPredicted RBP12.95□□□□□ -0.34
LIMK2-202ENST00000333611 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 EEF1GP26641 437 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 LONP1P36776 959 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 RFC5P40937 340 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 MECOMQ03112 1051 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PLCB4Q15147 1175 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PFKFB3Q16875 520 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ANKRD20A2Q5SQ80 823 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ANKRD20A1Q5TYW2 823 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ANKRD20A3Q5VUR7 823 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 EMBQ6PCB8 327 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 CEP128Q6ZU80 1094 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 FAM81AQ8TBF8 368 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 P2RX5Q93086 422 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 RPGRIP1Q96KN7 1286 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 TARSL2A2RTX5 802 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 FTCDO95954 541 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 LINGO3P0C6S8 592 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 FERP16591 822 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 SLCO1A2P46721 670 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 DPH5Q9H2P9 285 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ATRNO75882 1429 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 MST1RQ04912 1400 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 EPHB6O15197 1021 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF189O75820 626 aaPredicted RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 KIF11P52732 1056 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 RAD23BP54727 409 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 SKOR1P84550 965 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PYM1Q9BRP8 204 aaKnown RBP12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
LIMK2-202ENST00000333611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 DDAH1O94760 285 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 LUC7L3O95232 432 aaKnown RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 GLI1P08151 1106 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 CA8P35219 290 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 EIF6P56537 245 aaKnown RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 ZBED6P86452 979 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 DNAAF5Q86Y56 855 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 TRIM42Q8IWZ5 723 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 DCP1AQ9NPI6 582 aaPredicted RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 TRIM33Q9UPN9 1127 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 PCDHA13Q9Y5I0 950 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 MYH2Q9UKX2 1941 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 IGBP1P78318 339 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 NELFCDQ8IXH7 590 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 STXBP3O00186 592 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 OATP04181 439 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 POLD1P28340 1107 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 ALDH5A1P51649 535 aaPredicted RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 LRRC14Q15048 493 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 GJA10Q969M2 543 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 NAF1Q96HR8 494 aaKnown RBP12.93□□□□□ -0.34
LIMK2-202ENST00000333611 FGD4Q96M96 766 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 GBP5Q96PP8 586 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 DNAJC7Q99615 494 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 KDM4CQ9H3R0 1056 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 ECT2Q9H8V3 914 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
LIMK2-202ENST00000333611 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 EPS15P42566 896 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 ROR2Q01974 943 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 TTI2Q6NXR4 508 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 BICDL2A1A5D9 508 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CCT8L1PA6NM43 557 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF263O14978 683 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 AHCYL1O43865 530 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 SRGNP10124 158 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms