RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ASIC2Q16515 512 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 CLEC4GQ6UXB4 293 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 COA7Q96BR5 231 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 JPH2Q9BR39 696 aaPredicted RBP25.91■■□□□ 1.74
TSKU-201ENST00000333090 PANK4Q9NVE7 773 aa25.91■■□□□ 1.74
TSKU-201ENST00000333090 CEP104O60308 925 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 EPS15P42566 896 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 ARFGAP2Q8N6H7 521 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 GJA10Q969M2 543 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 DNAJC19Q96DA6 116 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 CDCA7Q9BWT1 371 aaPredicted RBP25.9■■□□□ 1.74
TSKU-201ENST00000333090 AP1M1Q9BXS5 423 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 ANKRD2Q9GZV1 360 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 BCCIPQ9P287 314 aaKnown RBP eCLIP25.9■■□□□ 1.74
TSKU-201ENST00000333090 TMEM59LQ9UK28 342 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 MYBP10242 640 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 ECHS1P30084 290 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 CTNNA1P35221 906 aaKnown RBP25.9■■□□□ 1.74
TSKU-201ENST00000333090 MAP2K2P36507 400 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 PPP4R3AQ6IN85 833 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 CYFIP2Q96F07 1278 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 VCPKMTQ9H867 229 aa25.9■■□□□ 1.74
TSKU-201ENST00000333090 BAG3O95817 575 aa25.89■■□□□ 1.74
TSKU-201ENST00000333090 PDIA5Q14554 519 aa25.89■■□□□ 1.74
TSKU-201ENST00000333090 DNAAF5Q86Y56 855 aa25.89■■□□□ 1.74
TSKU-201ENST00000333090 CCDC13Q8IYE1 715 aa25.89■■□□□ 1.74
TSKU-201ENST00000333090 CCDC88AQ3V6T2 1871 aa25.89■■□□□ 1.74
TSKU-201ENST00000333090 ACTN3Q08043 901 aaPredicted RBP25.89■■□□□ 1.73
TSKU-201ENST00000333090 GRIK5Q16478 980 aa25.89■■□□□ 1.73
TSKU-201ENST00000333090 TMEM119Q4V9L6 283 aa25.89■■□□□ 1.73
TSKU-201ENST00000333090 TRIM59Q8IWR1 403 aa25.89■■□□□ 1.73
TSKU-201ENST00000333090 EDIL3O43854 480 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 TNNI2P48788 182 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 CDK8P49336 464 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 GSCP56915 257 aaPredicted RBP25.88■■□□□ 1.73
TSKU-201ENST00000333090 CACNB1Q02641 598 aaPredicted RBP25.88■■□□□ 1.73
TSKU-201ENST00000333090 UAP1Q16222 522 aaPredicted RBP25.88■■□□□ 1.73
TSKU-201ENST00000333090 C8orf37Q96NL8 207 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 AIPL1Q9NZN9 384 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 THRAP3Q9Y2W1 955 aaKnown RBP25.88■■□□□ 1.73
TSKU-201ENST00000333090 FRMPD2Q68DX3 1309 aaPredicted RBP25.88■■□□□ 1.73
TSKU-201ENST00000333090 USP17L5A8MUK1 530 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 KIF4AO95239 1232 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 ODF2Q5BJF6 829 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 LRIG3Q6UXM1 1119 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 CEP95Q96GE4 821 aa25.88■■□□□ 1.73
TSKU-201ENST00000333090 ADCY7P51828 1080 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 PTK2Q05397 1052 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 CUL1Q13616 776 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 FOXR2Q6PJQ5 311 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 NBPF5PQ86XG9 351 aaPredicted RBP25.87■■□□□ 1.73
TSKU-201ENST00000333090 LRRC45Q96CN5 670 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 CEP63Q96MT8 703 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 ZNF287Q9HBT7 754 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 CD248Q9HCU0 757 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 ESYT2A0FGR8 921 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 GNPATO15228 680 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 TMOD1P28289 359 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 ZNF844Q08AG5 666 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.87■■□□□ 1.73
TSKU-201ENST00000333090 NLRP3Q96P20 1036 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 DDX47Q9H0S4 455 aaKnown RBP25.87■■□□□ 1.73
TSKU-201ENST00000333090 NEUROG2Q9H2A3 272 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 H0YGN5 161 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 SART1O43290 800 aaKnown RBP25.87■■□□□ 1.73
TSKU-201ENST00000333090 MARCH6O60337 910 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 UBLCP1Q8WVY7 318 aaPredicted RBP25.87■■□□□ 1.73
TSKU-201ENST00000333090 UIMC1Q96RL1 719 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 BMP2KQ9NSY1 1161 aaPredicted RBP25.87■■□□□ 1.73
TSKU-201ENST00000333090 NFS1Q9Y697 457 aa25.87■■□□□ 1.73
TSKU-201ENST00000333090 ACTN1P12814 892 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 USP11P51784 963 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 CCDC121Q6ZUS5 278 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 GMNCA6NCL1 334 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 GNA14O95837 355 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 DDR1Q08345 913 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 C6orf89Q6UWU4 347 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 SCFD2Q8WU76 684 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 GANQ9H2C0 597 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 KLC4Q9NSK0 619 aa25.86■■□□□ 1.73
TSKU-201ENST00000333090 TMCO5BA8MYB1 307 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 BACH1O14867 736 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 NEDD1Q8NHV4 660 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 SLC12A6Q9UHW9 1150 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 GGA2Q9UJY4 613 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 SMTNP53814 917 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 ADAM9Q13443 819 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 PBKQ96KB5 322 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 SPAG5Q96R06 1193 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 DDX20Q9UHI6 824 aaKnown RBP25.85■■□□□ 1.73
TSKU-201ENST00000333090 FBXL5Q9UKA1 691 aa25.85■■□□□ 1.73
TSKU-201ENST00000333090 WNK3Q9BYP7 1800 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 SNED1Q8TER0 1413 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 SRRM3A6NNA2 597 aaPredicted RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 HOXA7P31268 230 aaPredicted RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 FLT3P36888 993 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 KCNH2Q12809 1159 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 HERC4Q5GLZ8 1057 aaPredicted RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 ZNF571Q7Z3V5 609 aaPredicted RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 WDR66Q8TBY9 1149 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms