RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RNF146Q9NTX7 359 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 TMOD4Q9NZQ9 345 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 ZNF214Q9UL59 606 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 RNF225M0QZC1 329 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 ZBTB39O15060 712 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 NRDCO43847 1150 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 GYPCP04921 128 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 KRT18P05783 430 aaKnown RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 EIF2AK2P19525 551 aaKnown RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 OAZ1P54368 228 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 PGM5Q15124 567 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 NYAP1Q6ZVC0 841 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 PIGOQ8TEQ8 1089 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
DDX41-201ENST00000330503 TUBGCP2Q9BSJ2 902 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 RUSC1Q9BVN2 902 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 JADE2Q9NQC1 790 aa18.85■□□□□ 0.61
DDX41-201ENST00000330503 TERF1P54274 439 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 BAATQ14032 418 aaPredicted RBP18.84■□□□□ 0.61
DDX41-201ENST00000330503 ZCWPW2Q504Y3 356 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 FOXR2Q6PJQ5 311 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 NSMFQ6X4W1 530 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 SULF1Q8IWU6 871 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 PANX2Q96RD6 677 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 REEP2Q9BRK0 252 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 AGO4Q9HCK5 861 aaKnown RBP18.84■□□□□ 0.61
DDX41-201ENST00000330503 PXMP2Q9NR77 195 aa18.84■□□□□ 0.61
DDX41-201ENST00000330503 WRAP73Q9P2S5 460 aaPredicted RBP18.84■□□□□ 0.61
DDX41-201ENST00000330503 ATP2A1O14983 1001 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 STX10O60499 249 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 TNNT1P13805 278 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 CASP14P31944 242 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 FXR1P51114 621 aaKnown RBP eCLIP18.83■□□□□ 0.61
DDX41-201ENST00000330503 LRRC63Q05C16 580 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 ITGB3BPQ13352 177 aaPredicted RBP18.83■□□□□ 0.61
DDX41-201ENST00000330503 SNRNP48Q6IEG0 339 aaKnown RBP18.83■□□□□ 0.61
DDX41-201ENST00000330503 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 SCFD1Q8WVM8 642 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 RMDN3Q96TC7 470 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 BCAS3Q9H6U6 928 aa18.83■□□□□ 0.61
DDX41-201ENST00000330503 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.83■□□□□ 0.61
DDX41-201ENST00000330503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.83■□□□□ 0.616e-7■■■□□ 16
DDX41-201ENST00000330503 MIIPQ5JXC2 388 aa18.83■□□□□ 0.6
DDX41-201ENST00000330503 LRRC55Q6ZSA7 311 aa18.83■□□□□ 0.6
DDX41-201ENST00000330503 PPP1R13BQ96KQ4 1090 aa18.83■□□□□ 0.6
DDX41-201ENST00000330503 HOXC10Q9NYD6 342 aa18.83■□□□□ 0.6
DDX41-201ENST00000330503 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.6
DDX41-201ENST00000330503 A0A1W2PQC6 194 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 B4DLN1 442 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 MFAP3LO75121 409 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 PRKCSHP14314 528 aaPredicted RBP18.82■□□□□ 0.6
DDX41-201ENST00000330503 MUTP22033 750 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 RINT1Q6NUQ1 792 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 POLD4Q9HCU8 107 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 PAPPA2Q9BXP8 1791 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 SPDYE16A6NNV3 312 aaPredicted RBP18.82■□□□□ 0.6
DDX41-201ENST00000330503 RSPH10B2B2RC85 870 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 DDX39AO00148 427 aaKnown RBP18.82■□□□□ 0.6
DDX41-201ENST00000330503 RSPH10BP0C881 870 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 MYCLP12524 364 aaPredicted RBP18.82■□□□□ 0.6
DDX41-201ENST00000330503 C1orf186Q6ZWK4 172 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 RBM46Q8TBY0 533 aaKnown RBP18.82■□□□□ 0.6
DDX41-201ENST00000330503 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 ZHX3Q9H4I2 956 aa18.82■□□□□ 0.6
DDX41-201ENST00000330503 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
DDX41-201ENST00000330503 DNM2P50570 870 aa18.81■□□□□ 0.6
DDX41-201ENST00000330503 TREML2Q5T2D2 321 aa18.81■□□□□ 0.6
DDX41-201ENST00000330503 SFR1Q86XK3 245 aa18.81■□□□□ 0.6
DDX41-201ENST00000330503 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
DDX41-201ENST00000330503 NACC1Q96RE7 527 aa18.81■□□□□ 0.6
DDX41-201ENST00000330503 RASSF10A6NK89 507 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 PPP1R12BO60237 982 aaPredicted RBP18.8■□□□□ 0.6
DDX41-201ENST00000330503 CASP5P51878 434 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 ARHGEF16Q5VV41 709 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 EPM2AIP1Q7L775 607 aaPredicted RBP18.8■□□□□ 0.6
DDX41-201ENST00000330503 NELFCDQ8IXH7 590 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 TSG101Q99816 390 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 MYPNQ86TC9 1320 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 FGFR1OPO95684 399 aaKnown RBP18.8■□□□□ 0.6
DDX41-201ENST00000330503 FECHP22830 423 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 HOXD13P35453 343 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 MTMR1Q13613 665 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 VSIG10LQ86VR7 867 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 REXO1L1PQ8IX06 675 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 BANK1Q8NDB2 785 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 NOC4LQ9BVI4 516 aaKnown RBP18.8■□□□□ 0.6
DDX41-201ENST00000330503 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 CSADQ9Y600 493 aa18.8■□□□□ 0.6
DDX41-201ENST00000330503 OTOFQ9HC10 1997 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 PES1O00541 588 aaKnown RBP18.79■□□□□ 0.6
DDX41-201ENST00000330503 ATP9AO75110 1047 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 TBC1D8BQ0IIM8 1120 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 DPY19L2Q6NUT2 758 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
DDX41-201ENST00000330503 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms