RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
TPM3-206ENST00000330188 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
TPM3-206ENST00000330188 DEF6Q9H4E7 631 aa16.1■□□□□ 0.17
TPM3-206ENST00000330188 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
TPM3-206ENST00000330188 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
TPM3-206ENST00000330188 NOL4O94818 638 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 VSNL1P62760 191 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.172e-26■■■□□ 15.7
TPM3-206ENST00000330188 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
TPM3-206ENST00000330188 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 CYP2W1Q8TAV3 490 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 MMS19Q96T76 1030 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 CEP72Q9P209 647 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 DNM3Q9UQ16 869 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 STK24Q9Y6E0 443 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 TCP10L2B9ZVM9 353 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 CASP5P51878 434 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 STAT2P52630 851 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
TPM3-206ENST00000330188 ASTE1Q2TB18 679 aaPredicted RBP16.09■□□□□ 0.17
TPM3-206ENST00000330188 EDRF1Q3B7T1 1238 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
TPM3-206ENST00000330188 SPDYE2BA6NHP3 402 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 C21orf2O43822 256 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 AKR1B10O60218 316 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 ERLIN1O75477 346 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 SPDYE6P0CI01 402 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 ADAM9Q13443 819 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 ACER1Q8TDN7 264 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 REEP2Q9BRK0 252 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.16
TPM3-206ENST00000330188 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 ABCB6Q9NP58 842 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
TPM3-206ENST00000330188 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.16
TPM3-206ENST00000330188 SSU72P8A0A1W2PR75 194 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 CLRN2A0PK11 232 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 TUBBP07437 444 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 CKAP4Q07065 602 aaKnown RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 TRIM58Q8NG06 486 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 CAPZA3Q96KX2 299 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 MLXIPQ9HAP2 919 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 NLRC4Q9NPP4 1024 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 FAM184BQ9ULE4 1060 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 EML1O00423 815 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 ZNF76P36508 570 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 USP14P54578 494 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 FAM83BQ5T0W9 1011 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 WDR93Q6P2C0 686 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 ZNF771Q7L3S4 317 aaPredicted RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 L1RE1Q9UN81 338 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 TRAF3IP3Q9Y228 551 aa16.07■□□□□ 0.16
TPM3-206ENST00000330188 RBBP6Q7Z6E9 1792 aaKnown RBP16.07■□□□□ 0.16
TPM3-206ENST00000330188 CETN3O15182 167 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 ZNF185O15231 689 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 PJA2O43164 708 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 TLR2O60603 784 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 TACC1O75410 805 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 MOCS3O95396 460 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 OAS2P29728 719 aaKnown RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 HOXD13P35453 343 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 MAGEA1P43355 309 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 FAM193AP78312 1265 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 FAM151AQ8WW52 585 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 SYN2Q92777 582 aaPredicted RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 RPGRIP1Q96KN7 1286 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 EIF2AK1Q9BQI3 630 aaKnown RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 MYH10P35580 1976 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 CNTNAP1P78357 1384 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 NR2F2P24468 414 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 POLR2FP61218 127 aaKnown RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 GFPT1Q06210 699 aaPredicted RBP16.06■□□□□ 0.16
TPM3-206ENST00000330188 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 WDR18Q9BV38 432 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 RUSC1Q9BVN2 902 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 JADE2Q9NQC1 790 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 SNX12Q9UMY4 172 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
TPM3-206ENST00000330188 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms