RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CTTNQ14247 550 aaKnown RBP22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 TTI2Q6NXR4 508 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 ARMCX5Q6P1M9 558 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 GADL1Q6ZQY3 521 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 DYDC2Q96IM9 177 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 RIT2Q99578 217 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 TEKT3Q9BXF9 490 aa22.57■■□□□ 1.2
RIPPLY3-201ENST00000329553 A0A0G2JLL6 359 aaPredicted RBP22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 SPDYE5A6NIY4 337 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 CCNE1P24864 410 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 ARHGEF16Q5VV41 709 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 PRRT2Q7Z6L0 340 aaPredicted RBP22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 SMAP1Q8IYB5 467 aaPredicted RBP22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 SYT2Q8N9I0 419 aaPredicted RBP22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 P2RX5Q93086 422 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 PANK4Q9NVE7 773 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 PKD2L1Q9P0L9 805 aa22.56■■□□□ 1.2
RIPPLY3-201ENST00000329553 PPP1R2P41236 205 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 KCNJ6P48051 423 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 COASYQ13057 564 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 PSMD2Q13200 908 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 IRF2BP1Q8IU81 584 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 TUFT1Q9NNX1 390 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 ADD3Q9UEY8 706 aaKnown RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 CXCL11O14625 94 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 PEX10O60683 326 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 HOXA7P31268 230 aaPredicted RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 CACNB1Q02641 598 aaPredicted RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 ANKRD40Q6AI12 368 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 TPH2Q8IWU9 490 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 DUSP9Q99956 384 aaKnown RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 ACAD9Q9H845 621 aa22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 AGO4Q9HCK5 861 aaKnown RBP22.55■■□□□ 1.2
RIPPLY3-201ENST00000329553 LRRC10BA6NIK2 292 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 DHX15O43143 795 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 TEX33O43247 280 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 RAD51AP2Q09MP3 1159 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 MTMR1Q13613 665 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 LBX2Q6XYB7 198 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 PROCA1Q8NCQ7 364 aaPredicted RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 ZNF592Q92610 1267 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 SRRTQ9BXP5 876 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 TRMT1Q9NXH9 659 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 CYP39A1Q9NYL5 469 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 LIMA1Q9UHB6 759 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 DDX39AO00148 427 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 POTEJP0CG39 1038 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 ITGB3BPQ13352 177 aaPredicted RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 KRT31Q15323 416 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 EPHA7Q15375 998 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 TCP11X2Q5H9J9 407 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 E4F1Q66K89 784 aaPredicted RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 GLIS3Q8NEA6 775 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 CTAGE1Q96RT6 745 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 SEMA6BQ9H3T3 888 aa22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 A1CFQ9NQ94 594 aaKnown RBP22.54■■□□□ 1.2
RIPPLY3-201ENST00000329553 KCNJ18B7U540 433 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 KIF2AO00139 706 aaPredicted RBP22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 KCNJ12Q14500 433 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 ARMC9Q7Z3E5 817 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 PIGOQ8TEQ8 1089 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 BHMT2Q9H2M3 363 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 KCNH4Q9UQ05 1017 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 CLEC11AQ9Y240 323 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 BICDL2A1A5D9 508 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 EYA4O95677 639 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 SFPQP23246 707 aaKnown RBP eCLIP22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 SPAG1Q07617 926 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 LRRC41Q15345 812 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 CENPPQ6IPU0 288 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 VSIG10LQ86VR7 867 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 CREBRFQ8IUR6 639 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 CCDC65Q8IXS2 484 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 KCTD17Q8N5Z5 321 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 BTBD7Q9P203 1132 aa22.53■■□□□ 1.2
RIPPLY3-201ENST00000329553 KRT18P05783 430 aaKnown RBP22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 NR3C2P08235 984 aa22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 PPIL2Q13356 520 aa22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 GIT2Q14161 759 aa22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 GUF1Q8N442 669 aaKnown RBP22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 OPTNQ96CV9 577 aa22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 WRAP73Q9P2S5 460 aaPredicted RBP22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 PCDHA2Q9Y5H9 948 aa22.52■■□□□ 1.2
RIPPLY3-201ENST00000329553 ZBTB39O15060 712 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 FAM26FQ5R3K3 315 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 CSGALNACT2Q8N6G5 542 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 THAP9Q9H5L6 903 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 TBC1D7Q9P0N9 293 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 LOC285556D6RIA3 1793 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 FRMD3A2A2Y4 597 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 ATP9AO75110 1047 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 FILIP1LQ4L180 1135 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 HERC4Q5GLZ8 1057 aaPredicted RBP22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 LDLRAD1Q5T700 205 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 NSUN6Q8TEA1 469 aaKnown RBP22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 EEF2KMTQ96G04 330 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 FGFBP2Q9BYJ0 223 aa22.51■■□□□ 1.19
RIPPLY3-201ENST00000329553 TESPA1A2RU30 521 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms