RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DACT1Q9NYF0 836 aa18.58■□□□□ 0.56
PDLIM1-201ENST00000329399 MRVI1Q9Y6F6 885 aa18.58■□□□□ 0.56
PDLIM1-201ENST00000329399 LAD1O00515 517 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 KINO60870 393 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 CAVIN2O95810 425 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 MYL3P08590 195 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 ADCY7P51828 1080 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 JAKMIP3Q5VZ66 844 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 ARL6IP4Q66PJ3 421 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 CHRDL2Q6WN34 429 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 ELOA2Q8IYF1 753 aaPredicted RBP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 SLC43A3Q8NBI5 491 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 RASGRP4Q8TDF6 673 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 GLT1D1Q96MS3 346 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 FTOQ9C0B1 505 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 PRO3102Q9H379 93 aa18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 SRPRBQ9Y5M8 271 aaKnown RBP18.57■□□□□ 0.56
PDLIM1-201ENST00000329399 SYCE3A1L190 88 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 SPATA31C2B4DYI2 1134 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 EDIL3O43854 480 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 ATP9AO75110 1047 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 GH1P01241 217 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 LIG1P18858 919 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 UBA1P22314 1058 aaKnown RBP18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 FAAP100Q0VG06 881 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 HSDL1Q3SXM5 330 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 TTC38Q5R3I4 469 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 RBM43Q6ZSC3 357 aaKnown RBP18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 ENGASEQ8NFI3 743 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 PDLIM7Q9NR12 457 aa18.56■□□□□ 0.56
PDLIM1-201ENST00000329399 ARVCFO00192 962 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 GGPS1O95749 300 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 CELF3Q5SZQ8 465 aaKnown RBP18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 ANKRD33Q7Z3H0 272 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 KAT2BQ92831 832 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 CCDC34Q96HJ3 373 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 NAP1L4Q99733 375 aaKnown RBP18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 TSPY26PQ9H489 355 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 MYH7BA7E2Y1 1941 aa18.55■□□□□ 0.56
PDLIM1-201ENST00000329399 SPDYE3A6NKU9 549 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 MMP3P08254 477 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 ICAM3P32942 547 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 MAGEA10P43363 369 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 CPT1AP50416 773 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 MDM2Q00987 491 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 ITGA7Q13683 1181 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 DHX37Q8IY37 1157 aaKnown RBP18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 GDF15Q99988 308 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 ANO3Q9BYT9 981 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 UBIAD1Q9Y5Z9 338 aa18.54■□□□□ 0.56
PDLIM1-201ENST00000329399 A0A0U1RQG5 324 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 NR1I2O75469 434 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 NONOQ15233 471 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 RESP18Q5W5W9 173 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 PIK3AP1Q6ZUJ8 805 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 REXO1Q8N1G1 1221 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 TRPV6Q9H1D0 765 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 GRPEL1Q9HAV7 217 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 PRDM5Q9NQX1 630 aaPredicted RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 HOOK1Q9UJC3 728 aaKnown RBP18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 PCDHB6Q9Y5E3 794 aa18.53■□□□□ 0.56
PDLIM1-201ENST00000329399 ZEB2O60315 1214 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 TGFB3P10600 412 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 ATP2C1P98194 919 aaPredicted RBP18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 NBPF20Q3BBV1 942 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 FAM126BQ8IXS8 530 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 CRYGNQ8WXF5 182 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 UIMC1Q96RL1 719 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 HPSEQ9Y251 543 aa18.52■□□□□ 0.56
PDLIM1-201ENST00000329399 CABYRO75952 493 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 CD4P01730 458 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 ARP10275 920 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 MARCKSP29966 332 aaPredicted RBP18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 PRPHP41219 470 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 LAMC2Q13753 1193 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 KANK3Q6NY19 840 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 XRRA1Q6P2D8 792 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 PPTC7Q8NI37 304 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 SPATA33Q96N06 139 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 TOX2Q96NM4 488 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 MTG1Q9BT17 334 aaPredicted RBP18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 DOCK5Q9H7D0 1870 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 PKD2L1Q9P0L9 805 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 USP25Q9UHP3 1055 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 FBXO2Q9UK22 296 aaPredicted RBP18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 SCN10AQ9Y5Y9 1956 aa18.52■□□□□ 0.55
PDLIM1-201ENST00000329399 STAM2O75886 525 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 CLTBP09497 229 aa18.51■□□□□ 0.55
PDLIM1-201ENST00000329399 ZNF286BP0CG31 522 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms