RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CYP2D6P10635 497 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ABI1Q8IZP0 508 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 P4HBP07237 508 aaKnown RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 LRMPQ12912 555 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 UBE2SQ16763 222 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 PPP1R21Q6ZMI0 780 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 F5H6K3 240 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 PPP4CP60510 307 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 KLRC3Q07444 240 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 TTLL4Q14679 1199 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-201ENST00000328300 KCNK9Q9NPC2 374 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 INO80B-WBP1J3KQ70 363 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 VSTM4Q8IW00 320 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ODF2LQ9ULJ1 636 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 SERPING1P05155 500 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 MXI1P50539 228 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-201ENST00000328300 C16orf86Q6ZW13 317 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 TLDC2A0PJX2 215 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ARHGAP4P98171 946 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ATP2A3Q93084 1043 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 ZBTB24O43167 697 aaPredicted RBP12.42□□□□□ -0.42
COL4A5-201ENST00000328300 PHKA2P46019 1235 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 BBS5Q8N3I7 341 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 NUB1Q9Y5A7 615 aa12.42□□□□□ -0.42
COL4A5-201ENST00000328300 PPFIA4O75335 1185 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 SNRNP48Q6IEG0 339 aaKnown RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 LRFN2Q9ULH4 789 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 PCDHB4Q9Y5E5 795 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 MXRA7P84157 204 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 ITPK1Q13572 414 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 FLT1P17948 1338 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 EIF2AK2P19525 551 aaKnown RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 VPS18Q9P253 973 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 MYO1FO00160 1098 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 PBKQ96KB5 322 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 ST7Q9NRC1 585 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 PSMC5P62195 406 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 EPHA7Q15375 998 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
COL4A5-201ENST00000328300 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 RPF1Q9H9Y2 349 aaKnown RBP12.41□□□□□ -0.42
COL4A5-201ENST00000328300 IGBP1P78318 339 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 SLC15A2Q16348 729 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 MAP7D1Q3KQU3 841 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 DPCR1Q3MIW9 517 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 CCT6BQ92526 530 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 SCINQ9Y6U3 715 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 MEGF6O75095 1541 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 KRIT1O00522 736 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
COL4A5-201ENST00000328300 CASP14P31944 242 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 NLRP7Q8WX94 980 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 FAM114A2Q9NRY5 505 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-201ENST00000328300 MTMR4Q9NYA4 1195 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 A6NJR5 290 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 MTERF2Q49AM1 385 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 ATP8B1O43520 1251 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 ATP2C1P98194 919 aaPredicted RBP12.4□□□□□ -0.42
COL4A5-201ENST00000328300 ADGRF4Q8IZF3 695 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 NDST4Q9H3R1 872 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
COL4A5-201ENST00000328300 K7ERI5 159 aa12.4□□□□□ -0.43
COL4A5-201ENST00000328300 ARL1P40616 181 aaPredicted RBP12.4□□□□□ -0.43
COL4A5-201ENST00000328300 DONSONQ9NYP3 566 aa12.4□□□□□ -0.43
COL4A5-201ENST00000328300 UBXN2AP68543 259 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 MAP7Q14244 749 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 ESYT2A0FGR8 921 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 TYW5A2RUC4 315 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 KCNK3O14649 394 aa12.39□□□□□ -0.43
COL4A5-201ENST00000328300 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
COL4A5-201ENST00000328300 KCNB1Q14721 858 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms