RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PTPRFP10586 1907 aa16.6■□□□□ 0.25
TPM3-205ENST00000328159 EIF2AK2P19525 551 aaKnown RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 RAD51AP2Q09MP3 1159 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 PGM5Q15124 567 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 C16orf45Q96MC5 204 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 JADE2Q9NQC1 790 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 TRMT1Q9NXH9 659 aaKnown RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 ZNF214Q9UL59 606 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 MYPNQ86TC9 1320 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 FGFR1OPO95684 399 aaKnown RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 TPM2P07951 284 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 TERF1P54274 439 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 BAATQ14032 418 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 ZNF507Q8TCN5 953 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 EEF2KMTQ96G04 330 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 REEP2Q9BRK0 252 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 ZHX3Q9H4I2 956 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 HOXC10Q9NYD6 342 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.59■□□□□ 0.25
TPM3-205ENST00000328159 CSADQ9Y600 493 aa16.59■□□□□ 0.25
TPM3-205ENST00000328159 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 A0A1W2PQC6 194 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 STX10O60499 249 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 TPM1P09493 284 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
TPM3-205ENST00000328159 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
TPM3-205ENST00000328159 TRIM14Q14142 442 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 TMEM132BQ14DG7 1078 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 RUSC1Q9BVN2 902 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 FGFBP2Q9BYJ0 223 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.24
TPM3-205ENST00000328159 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
TPM3-205ENST00000328159 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
TPM3-205ENST00000328159 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
TPM3-205ENST00000328159 MFAP3LO75121 409 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 KIF20AO95235 890 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 GYPCP04921 128 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
TPM3-205ENST00000328159 TNNT1P13805 278 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 CASP14P31944 242 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 DNM2P50570 870 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 ZCWPW2Q504Y3 356 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 CNGA4Q8IV77 575 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 PIGOQ8TEQ8 1089 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
TPM3-205ENST00000328159 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
TPM3-205ENST00000328159 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 MTMR1Q13613 665 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 RINT1Q6NUQ1 792 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 NYAP1Q6ZVC0 841 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 PPP1R13BQ96KQ4 1090 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 PURBQ96QR8 312 aaKnown RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 B4DLN1 442 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 CCP110O43303 1012 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
TPM3-205ENST00000328159 PTPN14Q15678 1187 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 SCFD1Q8WVM8 642 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 PRIMPOLQ96LW4 560 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
TPM3-205ENST00000328159 WRAP73Q9P2S5 460 aaPredicted RBP16.56■□□□□ 0.24
TPM3-205ENST00000328159 LOC285556D6RIA3 1793 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 GAP43P17677 238 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 CCND2P30279 289 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 C1orf186Q6ZWK4 172 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
TPM3-205ENST00000328159 BANK1Q8NDB2 785 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms