RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TUFT1Q9NNX1 390 aa11.5□□□□□ -0.57
VIPAS39-201ENST00000327028 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 WDR64B1ANS9 1081 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 MED24O75448 989 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 CCNE2O96020 404 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 MUTP22033 750 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SP2Q02086 613 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 NEDD9Q14511 834 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 NAALADL2Q58DX5 795 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 IGHA2P01877 340 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SPATA31C1P0DKV0 1188 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 CYP2B6P20813 491 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 ECM1Q16610 540 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 SMAP1Q8IYB5 467 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 KCTD17Q8N5Z5 321 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 LRRC15Q8TF66 581 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 PLIN2Q99541 437 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 HSD17B14Q9BPX1 270 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 ABHD16BQ9H3Z7 469 aa11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 HOOK1Q9UJC3 728 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-201ENST00000327028 LOXHD1Q8IVV2 1947 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 GPR25O00155 361 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 ARIH2O95376 493 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 WDR81Q562E7 1941 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 FARP2O94887 1054 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 CCL14Q16627 93 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 METTL7BQ6UX53 244 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 PAGE5Q96GU1 130 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 PDGFCQ9NRA1 345 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 BLOC1S4Q9NUP1 217 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 KIAA1024Q9UPX6 916 aa11.48□□□□□ -0.57
VIPAS39-201ENST00000327028 SYCE3A1L190 88 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 GGPS1O95749 300 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 TXNP10599 105 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 ACTR2P61160 394 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CAP1Q01518 475 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 PRKCZQ05513 592 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 ACVR2BQ13705 512 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 POSTNQ15063 836 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 LY6KQ17RY6 165 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CELF3Q5SZQ8 465 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CD99L2Q8TCZ2 262 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 RAD54LQ92698 747 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 ERO1AQ96HE7 468 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 BCAS3Q9H6U6 928 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 GABRQQ9UN88 632 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 FKTNO75072 461 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 SLITRK3O94933 977 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 GNRH1P01148 92 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 ZNF445P59923 1031 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 CKAP2LQ8IYA6 745 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 LARP4BQ92615 738 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 LXNQ9BS40 222 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 KBTBD4Q9NVX7 518 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 PCDHA10Q9Y5I2 948 aa11.47□□□□□ -0.57
VIPAS39-201ENST00000327028 FOXN1O15353 648 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 PSAPP07602 524 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 FLT3LGP49771 235 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 PNOCQ13519 176 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 MIS18BP1Q6P0N0 1132 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 GRAMD1CQ8IYS0 662 aa11.46□□□□□ -0.57
VIPAS39-201ENST00000327028 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 SORBS3O60504 671 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 ATG7O95352 703 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 LYPLA2O95372 231 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 SUPT20HL2P0C7V6 817 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 HOXD10P28358 340 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 ADCYAP1R1P41586 468 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 AFMP43652 599 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 SP4Q02446 784 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 TPH2Q8IWU9 490 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms