RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MBOAT7Q96N66 472 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 SALL4Q9UJQ4 1053 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 ATAD5Q96QE3 1844 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 FKBP1AP62942 108 aaKnown RBP21.9■■□□□ 1.1
SOX2-201ENST00000325404 RASSF7Q02833 373 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 SUPT20HQ8NEM7 779 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 PSTPIP2Q9H939 334 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 USP40Q9NVE5 1235 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 A6NNZ2 444 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 BTNL10A8MVZ5 291 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 SLC1A4P43007 532 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 PDE4CQ08493 712 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 TUBB8Q3ZCM7 444 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 GLIS3Q8NEA6 775 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 KCNQ5Q9NR82 932 aa21.89■■□□□ 1.1
SOX2-201ENST00000325404 TLR2O60603 784 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 SLC18A3Q16572 532 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 MCTP2Q6DN12 878 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 SND1Q7KZF4 910 aaKnown RBP eCLIP21.89■■□□□ 1.09
SOX2-201ENST00000325404 SLC16A10Q8TF71 515 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 KCTD10Q9H3F6 313 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 PCDHGC5Q9Y5F6 944 aa21.89■■□□□ 1.09
SOX2-201ENST00000325404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.89■■□□□ 1.09
SOX2-201ENST00000325404 MARCH6O60337 910 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 PPFIA1Q13136 1202 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 UBE2SQ16763 222 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 C10orf76Q5T2E6 689 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 GSPT2Q8IYD1 628 aaKnown RBP21.88■■□□□ 1.09
SOX2-201ENST00000325404 HDAC7Q8WUI4 952 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 RASSF4Q9H2L5 321 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 KCNMB3Q9NPA1 279 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
SOX2-201ENST00000325404 GOLGA6CA6NDK9 693 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 CES2O00748 559 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 PLA2G4BP0C869 781 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 GOLGA6DP0CG33 693 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 AOC3Q16853 763 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 TDRD12Q587J7 1177 aaKnown RBP21.88■■□□□ 1.09
SOX2-201ENST00000325404 DACT2Q5SW24 774 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 DRC1Q96MC2 740 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 LSM14BQ9BX40 385 aaKnown RBP21.88■■□□□ 1.09
SOX2-201ENST00000325404 TMEM51Q9NW97 253 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 GOLGA6AQ9NYA3 693 aa21.88■■□□□ 1.09
SOX2-201ENST00000325404 CRKP46108 304 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 C8orf74Q6P047 294 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 STK24Q9Y6E0 443 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 ATP8B3O60423 1300 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 C21orf2O43822 256 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 SHMT1P34896 483 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 APBA1Q02410 837 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
SOX2-201ENST00000325404 CDC42EP5Q6NZY7 148 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 IFT20Q8IY31 132 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 SLFN12Q8IYM2 578 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 CCDC17Q96LX7 622 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 DDX4Q9NQI0 724 aaKnown RBP21.87■■□□□ 1.09
SOX2-201ENST00000325404 GDF3Q9NR23 364 aa21.87■■□□□ 1.09
SOX2-201ENST00000325404 KIAA0825Q8IV33 1275 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 TTLL6Q8N841 843 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 SCFD1Q8WVM8 642 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 MRIQ9BWK5 157 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 EMILIN3Q9NT22 766 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 CYP11B2P19099 503 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 ANXA13P27216 316 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 POLR2FP61218 127 aaKnown RBP21.86■■□□□ 1.09
SOX2-201ENST00000325404 RIN2Q8WYP3 895 aaPredicted RBP21.86■■□□□ 1.09
SOX2-201ENST00000325404 ZDHHC15Q96MV8 337 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 GDAP1L1Q96MZ0 367 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 EHD4Q9H223 541 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 NLRC4Q9NPP4 1024 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 LCMT1Q9UIC8 334 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 KIAA1024Q9UPX6 916 aa21.86■■□□□ 1.09
SOX2-201ENST00000325404 ATP2B2Q01814 1243 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 GRIPAP1Q4V328 841 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 MEI1Q5TIA1 1274 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 GANQ9H2C0 597 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 PLCB1Q9NQ66 1216 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 RBM12Q9NTZ6 932 aaKnown RBP21.85■■□□□ 1.09
SOX2-201ENST00000325404 BZW2Q9Y6E2 419 aaKnown RBP21.85■■□□□ 1.09
SOX2-201ENST00000325404 MYH10P35580 1976 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 MYH7BA7E2Y1 1941 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 CETN3O15182 167 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 NCK2O43639 380 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 HDLBPQ00341 1268 aaKnown RBP21.85■■□□□ 1.09
SOX2-201ENST00000325404 HERC4Q5GLZ8 1057 aaPredicted RBP21.85■■□□□ 1.09
SOX2-201ENST00000325404 TTBK2Q6IQ55 1244 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 GPBP1Q86WP2 473 aa21.85■■□□□ 1.09
SOX2-201ENST00000325404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.85■■□□□ 1.09
SOX2-201ENST00000325404 USP17L10C9JJH3 530 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 TBX3O15119 743 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 AP3B2Q13367 1082 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 FRMD5Q7Z6J6 570 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 MREGQ8N565 214 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 ANKRD13CQ8N6S4 541 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 EIF1ADQ8N9N8 165 aaKnown RBP21.84■■□□□ 1.09
SOX2-201ENST00000325404 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
SOX2-201ENST00000325404 TRAF3IP3Q9Y228 551 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms