RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 BCS1LQ9Y276 419 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 TMEM232C9JQI7 657 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 SLFN14P0C7P3 912 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CD58P19256 250 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 KCTD6Q8NC69 237 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ARMC2Q8NEN0 867 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CCDC124Q96CT7 223 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 ZCWPW1Q9H0M4 648 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CXorf56Q9H5V9 222 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 FBXL5Q9UKA1 691 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PCDHA12Q9UN75 941 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 TLR3O15455 904 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 KRT1P04264 644 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 LMNB1P20700 586 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 HADHAP40939 763 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 KIF11P52732 1056 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 RNASELQ05823 741 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PLA2G4DQ86XP0 818 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ALG13Q9NP73 1137 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 PSDA5PKW4 1024 aaPredicted RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 CHUKO15111 745 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 GYG2O15488 501 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 NOP14P78316 857 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 NSUN2Q08J23 767 aaKnown RBP eCLIP8.51□□□□□ -1.05
CIITA-201ENST00000324288 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.05
CIITA-201ENST00000324288 CNOT6LQ96LI5 555 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 ZWILCHQ9H900 591 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ZMYM6O95789 1325 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 RPRD2Q5VT52 1461 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 TSPOAP1O95153 1857 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 H7C1D1 291 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PMLP29590 882 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ADORA1P30542 326 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 SNAP25P60880 206 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 MAGOHP61326 146 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 TFAMQ00059 246 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 POLD4Q9HCU8 107 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ODR4Q5SWX8 454 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 LPIN2Q92539 896 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ARL8AQ96BM9 186 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ADAM21Q9UKJ8 722 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 MROH5Q6ZUA9 1318 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CLIC2O15247 247 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 DAB1O75553 588 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 BASP1P80723 227 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 KIF19Q2TAC6 998 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 DEPDC1BQ8WUY9 529 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PPP1R36Q96LQ0 422 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 TUBGCP2Q9BSJ2 902 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 GCNT4Q9P109 453 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ADA2Q9NZK5 511 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 SATB2Q9UPW6 733 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PFDN6O15212 129 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 MARK3P27448 753 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 ATP6V1E1P36543 226 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 PTGDRQ13258 359 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 GPR162Q16538 588 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 OLFML2BQ68BL8 750 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 URB2Q14146 1524 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 OCRLQ01968 901 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 SCRN1Q12765 414 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 SLMAPQ14BN4 828 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 PGRMC1O00264 195 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 DIAPH2O60879 1101 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 VCAM1P19320 739 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 BTDP43251 543 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 DARS2Q6PI48 645 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 CATSPER3Q86XQ3 398 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 FAM133AQ8N9E0 248 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 OTULINQ96BN8 352 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 NDE1Q9NXR1 346 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 MAP3K19Q56UN5 1328 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 E2F6O75461 281 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 GCP02774 474 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 BEND6Q5SZJ8 279 aaPredicted RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 TAGAPQ8N103 731 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 C7orf31Q8N865 590 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 HAUS4Q9H6D7 363 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 HSPH1Q92598 858 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 CALN1Q9BXU9 219 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 STX18Q9P2W9 335 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 CLRN2A0PK11 232 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 AFPP02771 609 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 HSPD1P10809 573 aaKnown RBP8.5□□□□□ -1.05
CIITA-201ENST00000324288 CA4P22748 312 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 EXOC3L4Q17RC7 722 aa8.5□□□□□ -1.05
CIITA-201ENST00000324288 CERKLQ49MI3 558 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms