RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 FAM210AQ96ND0 272 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 PACSIN2Q9UNF0 486 aaPredicted RBP8.55□□□□□ -1.04
CD46-201ENST00000322875 SLC4A4Q9Y6R1 1079 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 MYH4Q9Y623 1939 aa8.55□□□□□ -1.04
CD46-201ENST00000322875 ROBO1Q9Y6N7 1651 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 CAND2O75155 1236 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 SERPING1P05155 500 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 FERP16591 822 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 GNAT2P19087 354 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 FGFR2P21802 821 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 PHKA1P46020 1223 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 SEPT2Q15019 361 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 TBC1D25Q3MII6 688 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 SAMD1Q6SPF0 538 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 CACNA2D4Q7Z3S7 1137 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 CADPS2Q86UW7 1296 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 APLFQ8IW19 511 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 ADAM22Q9P0K1 906 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 PNMA2Q9UL42 364 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 SH3BP1Q9Y3L3 701 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 AHDC1Q5TGY3 1603 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 CCDC88AQ3V6T2 1871 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 ATP8B3O60423 1300 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 ZPR1O75312 459 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 MMEP08473 750 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 KRT16P08779 473 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 FCER1AP12319 257 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 EHHADHQ08426 723 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 HLTFQ14527 1009 aaKnown RBP eCLIP8.54□□□□□ -1.042e-6■■□□□ 13.6
CD46-201ENST00000322875 SLC18A3Q16572 532 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 TNS3Q68CZ2 1445 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 PNMA8AQ86V59 439 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 LCORLQ8N3X6 602 aa8.54□□□□□ -1.04
CD46-201ENST00000322875 UBLCP1Q8WVY7 318 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
CD46-201ENST00000322875 FAM205AQ6ZU69 1335 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CCDC188H7C350 402 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CYP27B1O15528 508 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 SNX3O60493 162 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 UBOX5O94941 541 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 KIF4AO95239 1232 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 UQCRFS1P1P0C7P4 283 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 GCLCP48506 637 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 ROR2Q01974 943 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 PDCD2Q16342 344 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 MTHFD1LQ6UB35 978 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 LRRC55Q6ZSA7 311 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 SRBD1Q8N5C6 995 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 ZSCAN10Q96SZ4 725 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 SLITRK6Q9H5Y7 841 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 ZDHHC18Q9NUE0 388 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CEP72Q9P209 647 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 STXBP3O00186 592 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 DAPK3O43293 454 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 DDAH1O94760 285 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 NPTXRO95502 500 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CCNB1P14635 433 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 VEGFAP15692 232 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 LMNB2Q03252 620 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 SNX1Q13596 522 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 HLFQ16534 295 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 PFKFB3Q16875 520 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 SGSM1Q2NKQ1 1148 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 KRT71Q3SY84 523 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 ANO7Q6IWH7 933 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 SLC30A9Q6PML9 568 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 SLFN11Q7Z7L1 901 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 TMEM60Q9H2L4 133 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 ATP6V0A2Q9Y487 856 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 A8MUI8 341 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 IGF2BP3O00425 579 aaKnown RBP eCLIP8.53□□□□□ -1.04
CD46-201ENST00000322875 PDE8BO95263 885 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CALM1P0DP23 149 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CALM2P0DP24 149 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 CALM3P0DP25 149 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 PAPOLAP51003 745 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 PPARDQ03181 441 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 PDE4DQ08499 809 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 IFIT5Q13325 482 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 FAM133BQ5BKY9 247 aaKnown RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 GALNT15Q8N3T1 639 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 MAGEB6Q8N7X4 407 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.046e-6■■□□□ 11.7
CD46-201ENST00000322875 TMEM109Q9BVC6 243 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 PACSIN1Q9BY11 444 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 YIPF3Q9GZM5 350 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms