RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CCDC28BQ9BUN5 200 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 WDR17Q8IZU2 1322 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 ARHGAP22Q7Z5H3 698 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 ECT2Q9H8V3 914 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 H7C0S8 307 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 FBXO31Q5XUX0 539 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 DHTKD1Q96HY7 919 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 FOXP1Q9H334 677 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 IPPQ9Y573 584 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 V9GY48 417 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 HNRNPRO43390 633 aaKnown RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 GSTA2P09210 222 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 LONRF2Q1L5Z9 754 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 RPAP1Q9BWH6 1393 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-201ENST00000322507 ARPC4-TTLL3A0A0A6YYG9 625 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 DEPTORQ8TB45 409 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 DACH2Q96NX9 599 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 PUDPQ08623 228 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 CCDC13Q8IYE1 715 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 CARD8Q9Y2G2 431 aa10.45□□□□□ -0.74
COL12A1-201ENST00000322507 B4E1Z4 1266 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 UFL1O94874 794 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 MORC3Q14149 939 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 HABP4Q5JVS0 413 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 FAM96AQ9H5X1 160 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 SLC52A2Q9HAB3 445 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 KLHL20Q9Y2M5 609 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 GSNP06396 782 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 KRT72Q14CN4 511 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 RAB44Q7Z6P3 723 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ABCF3Q9NUQ8 709 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PRR23AA6NEV1 266 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 S100A1P23297 94 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 YARSP54577 528 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ARHGEF18Q6ZSZ5 1173 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 CCSER2Q9H7U1 834 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TRIM56Q9BRZ2 755 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TADA3O75528 432 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ACTN1P12814 892 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TNNI1P19237 187 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 GCKRQ14397 625 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PIGUQ9H490 435 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 IKBKBO14920 756 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 GCP02774 474 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ARPC4P59998 168 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TBL3Q12788 808 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 NR1H3Q13133 447 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 LRRC8CQ8TDW0 803 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 MRGBPQ9NV56 204 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PDP2Q9P2J9 529 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 STOML2Q9UJZ1 356 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 STRIP2Q9ULQ0 834 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 E7ENQ6 273 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 CLASP2O75122 1294 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 SH3KBP1Q96B97 665 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 TFCP2L1Q9NZI6 479 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 NDUFA13Q9P0J0 144 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PRELID1Q9Y255 219 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 NSFP46459 744 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 EFR3AQ14156 821 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 CABP7Q86V35 215 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 BRD1O95696 1058 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ETF1P62495 437 aaKnown RBP10.44□□□□□ -0.74
COL12A1-201ENST00000322507 ARHGEF6Q15052 776 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PLEKHM3Q6ZWE6 761 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 SNX14Q9Y5W7 946 aa10.44□□□□□ -0.74
COL12A1-201ENST00000322507 BFSP2Q13515 415 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 KHDRBS2Q5VWX1 349 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 KRT40Q6A162 431 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 RRAGAQ7L523 313 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 NEK8Q86SG6 692 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 RUBCNQ92622 972 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 POLR3EQ9NVU0 708 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 HESX1Q9UBX0 185 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ATF2P15336 505 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 EPHB4P54760 987 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 SURF1Q15526 300 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 FAM178BQ8IXR5 827 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 HPS1Q92902 700 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 TESK2Q96S53 571 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CARD6Q9BX69 1037 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 RHBDL2Q9NX52 303 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 WARS2Q9UGM6 360 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 TXKP42681 527 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 KLC1Q07866 573 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 WASHC5Q12768 1159 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ASPRV1Q53RT3 343 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms