RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CLEC10AQ8IUN9 316 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 TBC1D16Q8TBP0 767 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 TBC1D5Q92609 795 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 GJA10Q969M2 543 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 ARL8AQ96BM9 186 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
CLK1-201ENST00000321356 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 POLLQ9UGP5 575 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
CLK1-201ENST00000321356 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 A6NNZ2 444 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 POTECB2RU33 542 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 MYBP10242 640 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 SHMT1P34896 483 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 CARSP49589 748 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 PAK2Q13177 524 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 TUBB8Q3ZCM7 444 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 ARSHQ5FYA8 562 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 TTBK2Q6IQ55 1244 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 CD302Q8IX05 232 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 EFCAB13Q8IY85 973 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 C1orf131Q8NDD1 294 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 ZIM3Q96PE6 472 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 PLEKHA4Q9H4M7 779 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 PSTPIP2Q9H939 334 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 PLCB1Q9NQ66 1216 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 TMEM59LQ9UK28 342 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 SUGT1Q9Y2Z0 365 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 USP17L10C9JJH3 530 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 BBOX1O75936 387 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 HEXIM1O94992 359 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 FTCDO95954 541 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 CPP00450 1065 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 FAM153BP0C7A2 387 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 HOXA10P31260 410 aaPredicted RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 USP11P51784 963 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 SLC12A3P55017 1021 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 EIF6P56537 245 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 KLHL30Q0D2K2 578 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 RAPGEF1Q13905 1077 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 ASIC2Q16515 512 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 CDC37Q16543 378 aaPredicted RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 KIAA0753Q2KHM9 967 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 FAM153CQ494X1 144 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 HERC4Q5GLZ8 1057 aaPredicted RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 C10orf76Q5T2E6 689 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 MOXD1Q6UVY6 613 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 IRF2BP2Q7Z5L9 587 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 NELFCDQ8IXH7 590 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 EIF1ADQ8N9N8 165 aaKnown RBP9.57□□□□□ -0.88
CLK1-201ENST00000321356 USP38Q8NB14 1042 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 CRYGNQ8WXF5 182 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 PPM1EQ8WY54 764 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 FAM107BQ9H098 131 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 TBC1D7Q9P0N9 293 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 FAM153AQ9UHL3 310 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 SERPINB13Q9UIV8 391 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 NFU1Q9UMS0 254 aa9.57□□□□□ -0.88
CLK1-201ENST00000321356 NPHP3-ACAD11A0A0J9YXS1 232 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 ZSCAN5CA6NGD5 496 aaPredicted RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 ZNF233A6NK53 670 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 CETN3O15182 167 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 SSBP05455 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLK1-201ENST00000321356 ZBTB48P10074 688 aaPredicted RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 DSG3P32926 999 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 SLC16A2P36021 539 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 NAP1L1P55209 391 aaKnown RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 GNGT1P63211 74 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 SPIRE1Q08AE8 756 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 ADAM9Q13443 819 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 PICALMQ13492 652 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 EPM2AIP1Q7L775 607 aaPredicted RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 FAM133AQ8N9E0 248 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 WHAMMQ8TF30 809 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.886e-7■■■■■ 27.3
CLK1-201ENST00000321356 PIK3R5Q8WYR1 880 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 RBM17Q96I25 401 aaKnown RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 PACSIN1Q9BY11 444 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 EHD4Q9H223 541 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 DHX36Q9H2U1 1008 aaKnown RBP9.56□□□□□ -0.88
CLK1-201ENST00000321356 KANSL2Q9H9L4 492 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 NENFQ9UMX5 172 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 TRAF3IP3Q9Y228 551 aa9.56□□□□□ -0.88
CLK1-201ENST00000321356 ADAMTSL1Q8N6G6 1762 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms