RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 USP17L6PQ6QN14 398 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 TRIM50Q86XT4 487 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 ZNF654Q8IZM8 581 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 GIMAP8Q8ND71 665 aaPredicted RBP16.39■□□□□ 0.21
RPP40-201ENST00000319533 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
RPP40-201ENST00000319533 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
RPP40-201ENST00000319533 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 NRCAMQ92823 1304 aa16.39■□□□□ 0.21
RPP40-201ENST00000319533 PI4K2BG5E9Z4 385 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 CTSHP09668 335 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 KIF5BP33176 963 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 PTPROQ16827 1216 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 CTCFLQ8NI51 663 aaPredicted RBP16.38■□□□□ 0.21
RPP40-201ENST00000319533 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 NEK9Q8TD19 979 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 CUL5Q93034 780 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 YME1L1Q96TA2 773 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 EHMT1Q9H9B1 1298 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 C11orf16Q9NQ32 467 aa16.38■□□□□ 0.21
RPP40-201ENST00000319533 CHRNA1P02708 482 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 KCNA2P16389 499 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 KCNA5P22460 613 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 GNAQP50148 359 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 ARHGAP4P98171 946 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
RPP40-201ENST00000319533 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 TMTC2Q8N394 836 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 FAM122AQ96E09 287 aa16.37■□□□□ 0.21
RPP40-201ENST00000319533 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
RPP40-201ENST00000319533 RBM8AQ9Y5S9 174 aaKnown RBP16.37■□□□□ 0.21
RPP40-201ENST00000319533 ATP9AO75110 1047 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 LINC00271P0C7V0 271 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 MGAT3Q09327 533 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 GPM6BQ13491 265 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 PUS10Q3MIT2 529 aaKnown RBP16.36■□□□□ 0.21
RPP40-201ENST00000319533 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
RPP40-201ENST00000319533 CDHR1Q96JP9 859 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
RPP40-201ENST00000319533 SEC63Q9UGP8 760 aaKnown RBP16.36■□□□□ 0.21
RPP40-201ENST00000319533 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 MBLAC1A4D2B0 266 aaPredicted RBP16.35■□□□□ 0.21
RPP40-201ENST00000319533 GRXCR2A6NFK2 248 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 C5orf67F2Z3F1 127 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 SH2B2O14492 632 aaPredicted RBP16.35■□□□□ 0.21
RPP40-201ENST00000319533 UPP2O95045 317 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 ITGB5P18084 799 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 TCF7P36402 384 aaPredicted RBP16.35■□□□□ 0.21
RPP40-201ENST00000319533 RUFY4Q6ZNE9 571 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 BANK1Q8NDB2 785 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 SEPT1Q8WYJ6 367 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 PABPC5Q96DU9 382 aaKnown RBP16.35■□□□□ 0.21
RPP40-201ENST00000319533 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 PSTPIP2Q9H939 334 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 RC3H2Q9HBD1 1191 aaKnown RBP16.35■□□□□ 0.21
RPP40-201ENST00000319533 UBIAD1Q9Y5Z9 338 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 KAT6AQ92794 2004 aa16.35■□□□□ 0.21
RPP40-201ENST00000319533 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 MAFGO15525 162 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 PRC1O43663 620 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 RB1P06400 928 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 IL9P15248 144 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 LIFRP42702 1097 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 LPIN1Q14693 890 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 MARCH8Q5T0T0 291 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 PTCRAQ6ISU1 281 aaPredicted RBP16.34■□□□□ 0.21
RPP40-201ENST00000319533 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
RPP40-201ENST00000319533 GJD3Q8N144 294 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 NSUN3Q9H649 340 aaKnown RBP16.34■□□□□ 0.21
RPP40-201ENST00000319533 ERAP1Q9NZ08 941 aa16.34■□□□□ 0.21
RPP40-201ENST00000319533 ENPP3O14638 875 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 NEFLP07196 543 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 CALM1P0DP23 149 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 CALM2P0DP24 149 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 CALM3P0DP25 149 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 MCM5P33992 734 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 SP4Q02446 784 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 PPFIA1Q13136 1202 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
RPP40-201ENST00000319533 TCEAL5Q5H9L2 206 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 FIBCD1Q8N539 461 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 CLP1Q92989 425 aaKnown RBP16.33■□□□□ 0.2
RPP40-201ENST00000319533 ZNF689Q96CS4 500 aaPredicted RBP16.33■□□□□ 0.2
RPP40-201ENST00000319533 LMAN2LQ9H0V9 348 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 SMARCAD1Q9H4L7 1026 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 JADE2Q9NQC1 790 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 HCN4Q9Y3Q4 1203 aa16.33■□□□□ 0.2
RPP40-201ENST00000319533 NCK2O43639 380 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms