RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TNFRSF25Q93038 417 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 OSBPL7Q9BZF2 842 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 THRAP3Q9Y2W1 955 aaKnown RBP15.55■□□□□ 0.08
PABPC1-201ENST00000318607 GFPT2O94808 682 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 ADAMTS2O95450 1211 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 GCKP35557 465 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 ADAM9Q13443 819 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 PRCCQ92733 491 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-201ENST00000318607 STAMBPL1Q96FJ0 436 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 LEMD3Q9Y2U8 911 aa15.55■□□□□ 0.08
PABPC1-201ENST00000318607 COL16A1Q07092 1604 aaPredicted RBP15.55■□□□□ 0.08
PABPC1-201ENST00000318607 DBR1Q9UK59 544 aaKnown RBP15.54■□□□□ 0.08
PABPC1-201ENST00000318607 NR2E1Q9Y466 385 aa15.54■□□□□ 0.08
PABPC1-201ENST00000318607 TAL1P17542 331 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-201ENST00000318607 TRIP13Q15645 432 aaPredicted RBP15.54■□□□□ 0.08
PABPC1-201ENST00000318607 ERFEQ4G0M1 354 aa15.54■□□□□ 0.08
PABPC1-201ENST00000318607 RIOK1Q9BRS2 568 aaKnown RBP15.54■□□□□ 0.08
PABPC1-201ENST00000318607 SLC37A4O43826 429 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 PTK2Q05397 1052 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 NEK8Q86SG6 692 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 MYOCDQ8IZQ8 938 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 IQCKQ8N0W5 287 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 RPGRQ92834 1020 aaKnown RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 YY1AP1Q9H869 796 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 FAM107AO95990 144 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 FGFR2P21802 821 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 TMEM266Q2M3C6 531 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 C1orf167Q5SNV9 1468 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 ZFYVE27Q5T4F4 411 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 PYM1Q9BRP8 204 aaKnown RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 TTYH3Q9C0H2 523 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 LRP6O75581 1613 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 TLR2O60603 784 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 CAND2O75155 1236 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 LGR5O75473 907 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 FGFR4P22455 802 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 PABPC4Q13310 644 aaKnown RBP eCLIP15.53■□□□□ 0.081e-323■■■■■ 51.9
PABPC1-201ENST00000318607 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 CTNNBL1Q8WYA6 563 aaPredicted RBP15.53■□□□□ 0.08
PABPC1-201ENST00000318607 PANK4Q9NVE7 773 aa15.53■□□□□ 0.08
PABPC1-201ENST00000318607 SHBGP04278 402 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 ARFGAP2Q8N6H7 521 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 SLC17A8Q8NDX2 589 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 ZNF384Q8TF68 577 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-201ENST00000318607 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 IL17RBQ9NRM6 502 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 NOC2LQ9Y3T9 749 aaKnown RBP15.52■□□□□ 0.08
PABPC1-201ENST00000318607 PHLPP1O60346 1717 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 GJC1P36383 396 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 TNIP1Q15025 636 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 FAM26FQ5R3K3 315 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 HP1BP3Q5SSJ5 553 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-201ENST00000318607 ALKBH5Q6P6C2 394 aaKnown RBP15.52■□□□□ 0.08
PABPC1-201ENST00000318607 SEPT14Q6ZU15 432 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 FAM47EQ6ZV65 393 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 C4orf32Q8N8J7 132 aa15.52■□□□□ 0.08
PABPC1-201ENST00000318607 GRID2IPA4D2P6 1211 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 CHMP2AO43633 222 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 MMEP08473 750 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 YY1P25490 414 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 SCTRP47872 440 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 ZNF844Q08AG5 666 aa15.52■□□□□ 0.07
PABPC1-201ENST00000318607 UBAP2Q5T6F2 1119 aaKnown RBP15.52■□□□□ 0.07
PABPC1-201ENST00000318607 ZNF746Q6NUN9 644 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-201ENST00000318607 FAM84BQ96KN1 310 aaPredicted RBP15.52■□□□□ 0.07
PABPC1-201ENST00000318607 H0Y3Z8 333 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 DDAH1O94760 285 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 NR2F2P24468 414 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 IFI35P80217 286 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 KCNMA1Q12791 1236 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 EAPPQ56P03 285 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 FUKQ8N0W3 1084 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 METTL13Q8N6R0 699 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 CCDC63Q8NA47 563 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 PIK3R5Q8WYR1 880 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 PRMT1Q99873 361 aaKnown RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 AZI2Q9H6S1 392 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 ACSL3O95573 720 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 FNTAP49354 379 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 ITGB3BPQ13352 177 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 MTM1Q13496 603 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 SNX1Q13596 522 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 ARL6IP4Q66PJ3 421 aaKnown RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 RCSD1Q6JBY9 416 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 KDM7AQ6ZMT4 941 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 GPBP1Q86WP2 473 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 TAB3Q8N5C8 712 aaPredicted RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 FAM118BQ9BPY3 351 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 VCPKMTQ9H867 229 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 TRIM33Q9UPN9 1127 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms