RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 HOXA13P31271 388 aaPredicted RBP17.6■□□□□ 0.41
USH1C-202ENST00000318024 EFCAB13Q8IY85 973 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 ADSSL1Q8N142 457 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 P2RX7Q99572 595 aaKnown RBP17.6■□□□□ 0.41
USH1C-202ENST00000318024 LACRTQ9GZZ8 138 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 EMILIN3Q9NT22 766 aa17.6■□□□□ 0.41
USH1C-202ENST00000318024 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 ANKRD65E5RJM6 399 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 RPN1P04843 607 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 SUPT20HL1Q3ZLR7 823 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 AENQ8WTP8 325 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 PYM1Q9BRP8 204 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 SELENOOQ9BVL4 669 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 TANGO6Q9C0B7 1094 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 JRKLQ9Y4A0 524 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 SSC5DA1L4H1 1573 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 POLR2AP24928 1970 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 ANO9A1A5B4 782 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 OPLAHO14841 1288 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 PMS1P54277 932 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 CKAP4Q07065 602 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 DNAJC21Q5F1R6 531 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 CCDC122Q5T0U0 273 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 DTHD1Q6ZMT9 781 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
USH1C-202ENST00000318024 LUC7L2Q9Y383 392 aaKnown RBP17.59■□□□□ 0.41
USH1C-202ENST00000318024 SLC37A4O43826 429 aa17.58■□□□□ 0.4
USH1C-202ENST00000318024 VCAM1P19320 739 aa17.58■□□□□ 0.4
USH1C-202ENST00000318024 EPHX2P34913 555 aa17.58■□□□□ 0.4
USH1C-202ENST00000318024 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
USH1C-202ENST00000318024 ARL6IP4Q66PJ3 421 aaKnown RBP17.58■□□□□ 0.4
USH1C-202ENST00000318024 ZNF572Q7Z3I7 529 aaPredicted RBP17.58■□□□□ 0.4
USH1C-202ENST00000318024 JAKMIP2Q96AA8 810 aa17.58■□□□□ 0.4
USH1C-202ENST00000318024 PPP2R3BQ9Y5P8 575 aa17.58■□□□□ 0.4
USH1C-202ENST00000318024 TRIM49BA6NDI0 452 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 GJA10Q969M2 543 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 RANBP17Q9H2T7 1088 aaKnown RBP17.57■□□□□ 0.4
USH1C-202ENST00000318024 RMND1Q9NWS8 449 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
USH1C-202ENST00000318024 ZMYND10O75800 440 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 GUCY2CP25092 1073 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 EEF1GP26641 437 aaKnown RBP17.57■□□□□ 0.4
USH1C-202ENST00000318024 HMGCS2P54868 508 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 BACE1P56817 501 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 FAM160B2Q86V87 743 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 SUGP1Q8IWZ8 645 aaKnown RBP17.57■□□□□ 0.4
USH1C-202ENST00000318024 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
USH1C-202ENST00000318024 CPXCR1Q8N123 301 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 SH3GL2Q99962 352 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 PITPNM2Q9BZ72 1349 aa17.57■□□□□ 0.4
USH1C-202ENST00000318024 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 WDR46O15213 610 aaKnown RBP17.56■□□□□ 0.4
USH1C-202ENST00000318024 ZNF185O15231 689 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 KLRC4O43908 158 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 FLOT1O75955 427 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 CFBP00751 764 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 TECP42680 631 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 TXKP42681 527 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 IRAK1P51617 712 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 KRT83P78385 493 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 NAALADL2Q58DX5 795 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 LPAR1Q92633 364 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 PLIN2Q99541 437 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 THAP9Q9H5L6 903 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
USH1C-202ENST00000318024 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 MMGT1Q8N4V1 131 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 CAPZA3Q96KX2 299 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 SMCHD1A6NHR9 2005 aa17.56■□□□□ 0.4
USH1C-202ENST00000318024 KRT86O43790 486 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 ITIH3Q06033 890 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 KCNB1Q14721 858 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 CREG2Q8IUH2 290 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
USH1C-202ENST00000318024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.55■□□□□ 0.4
USH1C-202ENST00000318024 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 L3MBTL3Q96JM7 780 aaPredicted RBP17.55■□□□□ 0.4
USH1C-202ENST00000318024 GDAP1L1Q96MZ0 367 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 AGPAT5Q9NUQ2 364 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 FAM184BQ9ULE4 1060 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 MAPK8IP1Q9UQF2 711 aa17.55■□□□□ 0.4
USH1C-202ENST00000318024 ATAD5Q96QE3 1844 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms