RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
TPM1-203ENST00000317516 GLG1Q92896 1179 aa20.29■□□□□ 0.84
TPM1-203ENST00000317516 SDF4Q9BRK5 362 aa20.29■□□□□ 0.84
TPM1-203ENST00000317516 KCNH7Q9NS40 1196 aa20.29■□□□□ 0.84
TPM1-203ENST00000317516 ERAP1Q9NZ08 941 aa20.29■□□□□ 0.84
TPM1-203ENST00000317516 PKD2L1Q9P0L9 805 aa20.29■□□□□ 0.84
TPM1-203ENST00000317516 SCG2P13521 617 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 ZNF76P36508 570 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 ARHGAP4P98171 946 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 CEP55Q53EZ4 464 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 PPM1EQ8WY54 764 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 ANO3Q9BYT9 981 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 AZI2Q9H6S1 392 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 JPH1Q9HDC5 661 aaPredicted RBP20.28■□□□□ 0.84
TPM1-203ENST00000317516 A0A0C4DFX4 3053 aa20.28■□□□□ 0.84
TPM1-203ENST00000317516 GSTTP1A0A1W2PQM5 241 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 ADGRE1Q14246 886 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 MBTPS1Q14703 1052 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 AGXT2Q9BYV1 514 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 SLC9A2Q9UBY0 812 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 TELO2Q9Y4R8 837 aa20.27■□□□□ 0.84
TPM1-203ENST00000317516 MYH7BA7E2Y1 1941 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 PRPF3O43395 683 aaKnown RBP20.26■□□□□ 0.83
TPM1-203ENST00000317516 GNA11P29992 359 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 SREBF1P36956 1147 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 ADAM17P78536 824 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 PPFIA1Q13136 1202 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 RSPH3Q86UC2 560 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 DBF4BQ8NFT6 615 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 LMBR1Q8WVP7 490 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 SEPT8Q92599 483 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 RAD9AQ99638 391 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 NFASCO94856 1347 aa20.26■□□□□ 0.83
TPM1-203ENST00000317516 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 MEIS1O00470 390 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
TPM1-203ENST00000317516 GJB5O95377 273 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 AMHP03971 560 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 CLK2P49760 499 aaKnown RBP20.25■□□□□ 0.83
TPM1-203ENST00000317516 DEFB103AP81534 67 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 TAP1Q03518 808 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 PLEKHG4Q58EX7 1191 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 NIPA1Q7RTP0 329 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 CYP2W1Q8TAV3 490 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 SYMPKQ92797 1274 aaKnown RBP20.25■□□□□ 0.83
TPM1-203ENST00000317516 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
TPM1-203ENST00000317516 TMEM260Q9NX78 707 aa20.25■□□□□ 0.83
TPM1-203ENST00000317516 RRN3P2A6NIE6 340 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 RPLP2P05387 115 aaKnown RBP20.24■□□□□ 0.83
TPM1-203ENST00000317516 CTSHP09668 335 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 MARK3P27448 753 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 CCDC85BQ15834 202 aaPredicted RBP20.24■□□□□ 0.83
TPM1-203ENST00000317516 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 RUFY3Q7L099 469 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 COL25A1Q9BXS0 654 aaPredicted RBP20.24■□□□□ 0.83
TPM1-203ENST00000317516 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
TPM1-203ENST00000317516 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
TPM1-203ENST00000317516 ARP10275 920 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 EVCP57679 992 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 ACTR2P61160 394 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 SCN5AQ14524 2016 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 GRIK4Q16099 956 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 FAM26DQ5JW98 314 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 APBB2Q92870 758 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
TPM1-203ENST00000317516 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
TPM1-203ENST00000317516 NID2Q14112 1375 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 CYP3A4P08684 503 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 IFNAR1P17181 557 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 POU3F3P20264 500 aaPredicted RBP20.22■□□□□ 0.83
TPM1-203ENST00000317516 PDIA3P30101 505 aaKnown RBP20.22■□□□□ 0.83
TPM1-203ENST00000317516 STAT5BP51692 787 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 PKN1Q16512 942 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 TCTN1Q2MV58 587 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 PLPPR4Q7Z2D5 763 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
TPM1-203ENST00000317516 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
TPM1-203ENST00000317516 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
TPM1-203ENST00000317516 MYO9BQ13459 2157 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 MBLAC1A4D2B0 266 aaPredicted RBP20.21■□□□□ 0.83
TPM1-203ENST00000317516 SLC26A2P50443 739 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
TPM1-203ENST00000317516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
TPM1-203ENST00000317516 TMCO2Q7Z6W1 182 aaPredicted RBP20.21■□□□□ 0.83
TPM1-203ENST00000317516 PLA2G4DQ86XP0 818 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 MYOCDQ8IZQ8 938 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 ATXN2LQ8WWM7 1075 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms