RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PACS2Q86VP3 889 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 TMEM260Q9NX78 707 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 RNF181Q9P0P0 153 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 HACL1Q9UJ83 578 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 GGA1Q9UJY5 639 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 A0A0A6YYK5 440 aaPredicted RBP8.73□□□□□ -1.01
CNOT4-201ENST00000315544 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 PTGIRP43119 386 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 RGS19P49795 217 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 TNIP1Q15025 636 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 PLXNA3P51805 1871 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 GTPBP10A4D1E9 387 aaKnown RBP8.73□□□□□ -1.01
CNOT4-201ENST00000315544 CCP110O43303 1012 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 PEX5P50542 639 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 GIT2Q14161 759 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 VWA3BQ502W6 1294 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 SPDYCQ5MJ68 293 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
CNOT4-201ENST00000315544 LNX1Q8TBB1 728 aaPredicted RBP8.73□□□□□ -1.01
CNOT4-201ENST00000315544 SLCO2A1Q92959 643 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF317Q96PQ6 595 aaPredicted RBP8.73□□□□□ -1.01
CNOT4-201ENST00000315544 AAASQ9NRG9 546 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 CEP131Q9UPN4 1083 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 REV3LO60673 3130 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 PLXNA4Q9HCM2 1894 aa8.73□□□□□ -1.01
CNOT4-201ENST00000315544 SHTN1A0MZ66 631 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 EPHX2P34913 555 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 SDF4Q9BRK5 362 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 PPP1R1BQ9UD71 204 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-201ENST00000315544 PCDHAC2Q9Y5I4 1007 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 FAM86B1E9PN63 330 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 MED24O75448 989 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 FAM86B2P0C5J1 330 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 DNM2P50570 870 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 KRT26Q7Z3Y9 468 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 ACTRT1Q8TDG2 376 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 NOC3LQ8WTT2 800 aaKnown RBP8.72□□□□□ -1.01
CNOT4-201ENST00000315544 TUBGCP2Q9BSJ2 902 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 STK17AQ9UEE5 414 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 COG5Q9UP83 839 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 B4DLN1 442 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 F8W031 263 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-201ENST00000315544 GOLGA6L19H0YKK7 550 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 RASSF9O75901 435 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 FAM155BO75949 473 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 TDP2O95551 362 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 DIXDC1Q155Q3 683 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 DPP8Q6V1X1 898 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-201ENST00000315544 GOLGA5Q8TBA6 731 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 SMCR8Q8TEV9 937 aaPredicted RBP8.72□□□□□ -1.01
CNOT4-201ENST00000315544 GOLGA1Q92805 767 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 LZTS2Q9BRK4 669 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 PDE11AQ9HCR9 933 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 NR2E1Q9Y466 385 aa8.72□□□□□ -1.01
CNOT4-201ENST00000315544 IRF6O14896 467 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 PSMD10O75832 226 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 POTEIP0CG38 1075 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 POTEJP0CG39 1038 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 ALADP13716 330 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 KCNJ4P48050 445 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 LRRC63Q05C16 580 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 EDRF1Q3B7T1 1238 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 JAKMIP3Q5VZ66 844 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 C1orf186Q6ZWK4 172 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 RALYLQ86SE5 291 aaKnown RBP8.71□□□□□ -1.01
CNOT4-201ENST00000315544 OR8K1Q8NGG5 319 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.01
CNOT4-201ENST00000315544 FLT3P36888 993 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 GMPSP49915 693 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 KLRC3Q07444 240 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 PSMD2Q13200 908 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 SPATA4Q8NEY3 305 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 STAMQ92783 540 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 IQCDQ96DY2 449 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 WDR18Q9BV38 432 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 GRHL1Q9NZI5 618 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 TPM1P09493 284 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 GCAP28676 217 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 HIBADHP31937 336 aaKnown RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 ACTN2P35609 894 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 NPEPPSP55786 919 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 LBX2Q6XYB7 198 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 SUGP1Q8IWZ8 645 aaKnown RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 C12orf56Q8IXR9 622 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 KCTD17Q8N5Z5 321 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 FAM71BQ8TC56 605 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 SLC35C1Q96A29 364 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 GMCL1Q96IK5 515 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 OSBPL9Q96SU4 736 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 LRRC1Q9BTT6 524 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms