RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CYP26C1Q6V0L0 522 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 SCFD1Q8WVM8 642 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 RUSC1Q9BVN2 902 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 ARGLU1Q9NWB6 273 aaPredicted RBP13.76□□□□□ -0.21
RNF4-201ENST00000314289 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
RNF4-201ENST00000314289 TBC1D12O60347 775 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 KCNA1Q09470 495 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 HYIQ5T013 277 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 CCDC65Q8IXS2 484 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 MTMR14Q8NCE2 650 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
RNF4-201ENST00000314289 DYDC2Q96IM9 177 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
RNF4-201ENST00000314289 PHLPP2Q6ZVD8 1323 aa13.76□□□□□ -0.21
RNF4-201ENST00000314289 FLOT1O75955 427 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
RNF4-201ENST00000314289 RPA1P27694 616 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 CYP27A1Q02318 531 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 TNIP1Q15025 636 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 FKBP1CQ5VVH2 108 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 TMTC1Q8IUR5 882 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 NEK11Q8NG66 645 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 REXO2Q9Y3B8 237 aaKnown RBP13.75□□□□□ -0.21
RNF4-201ENST00000314289 MYBP10242 640 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 SPP2Q13103 211 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 GIT2Q14161 759 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 VWA3BQ502W6 1294 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 LRRC27Q9C0I9 530 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 WRAP73Q9P2S5 460 aaPredicted RBP13.75□□□□□ -0.21
RNF4-201ENST00000314289 CAPN11Q9UMQ6 739 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 GUCA1BQ9UMX6 200 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 PCDHA2Q9Y5H9 948 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 ZNF536O15090 1300 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 GAS7O60861 476 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 CIITAP33076 1130 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 MUM1L1Q5H9M0 696 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 TSG101Q99816 390 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
RNF4-201ENST00000314289 MRPL11Q9Y3B7 192 aaKnown RBP13.75□□□□□ -0.21
RNF4-201ENST00000314289 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
RNF4-201ENST00000314289 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 NDUFA10O95299 355 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 CYP2C19P33261 490 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
RNF4-201ENST00000314289 TRIM14Q14142 442 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 TSR1Q2NL82 804 aaKnown RBP13.74□□□□□ -0.21
RNF4-201ENST00000314289 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 SH2D4AQ9H788 454 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 KIF4BQ2VIQ3 1234 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 CEP55Q53EZ4 464 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 WDR11Q9BZH6 1224 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 TTYH3Q9C0H2 523 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
RNF4-201ENST00000314289 TBX3O15119 743 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 SLITRK3O94933 977 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 PSMD2Q13200 908 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
RNF4-201ENST00000314289 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
RNF4-201ENST00000314289 SLC35F6Q8N357 371 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 DNAJC7Q99615 494 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 GOLGA6L9A6NEM1 432 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 KIF5CO60282 957 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 ITGB5P18084 799 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
RNF4-201ENST00000314289 PTGER2P43116 358 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
RNF4-201ENST00000314289 DUSP10Q9Y6W6 482 aa13.73□□□□□ -0.21
RNF4-201ENST00000314289 CLIC2O15247 247 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 CYP3A4P08684 503 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 VCAM1P19320 739 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 PPP1R2P41236 205 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 ARHGAP25P42331 645 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 ADAM9Q13443 819 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms