RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ACTR2P61160 394 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 GRIN1Q05586 938 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 PDIA5Q14554 519 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 ABHD15Q6UXT9 468 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 SMAP1Q8IYB5 467 aaPredicted RBP14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 KLHDC9Q8NEP7 349 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 RDM1Q8NG50 284 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 GPR20Q99678 358 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 RNF208Q9H0X6 261 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
CHMP2A-201ENST00000312547 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 MYADML2A6NDP7 307 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 WDR64B1ANS9 1081 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 EML1O00423 815 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 PGK1P00558 417 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 MYCP01106 439 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 GJB1P08034 283 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 MMP3P08254 477 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 CST5P28325 142 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 SFNP31947 248 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 TECP42680 631 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 JAK3P52333 1124 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 FSCN1Q16658 493 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 CCSAPQ6IQ19 270 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 SEPT1Q8WYJ6 367 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 DEFB118Q96PH6 123 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 AP5M1Q9H0R1 490 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 OGDHLQ9ULD0 1010 aa14.25□□□□□ -0.13
CHMP2A-201ENST00000312547 MYH15Q9Y2K3 1946 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 POTEMA6NI47 508 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 CHMP2AO43633 222 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 PPFIA4O75335 1185 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 SUPT20HL2P0C7V6 817 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 LONP1P36776 959 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 SOX10P56693 466 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 SP4Q02446 784 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 EPHA7Q15375 998 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 TMEM266Q2M3C6 531 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 MIER3Q7Z3K6 550 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 SPATA32Q96LK8 384 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 PCYT2Q99447 389 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 SPC25Q9HBM1 224 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 GDPD2Q9HCC8 539 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 DISC1Q9NRI5 854 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 TCEAL9Q9UHQ7 104 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 PCDHA10Q9Y5I2 948 aa14.24□□□□□ -0.13
CHMP2A-201ENST00000312547 NOP56O00567 594 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 CUTAO60888 179 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 LGR5O75473 907 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 C6orf222P0C671 652 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 CPT1AP50416 773 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 LRRC41Q15345 812 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 NCAPH2Q6IBW4 605 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 MIS18BP1Q6P0N0 1132 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 U2AF1L4Q8WU68 220 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 AK8Q96MA6 479 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 HSD17B14Q9BPX1 270 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 MMTAG2Q9BU76 263 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 RAB34Q9BZG1 259 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 LRWD1Q9UFC0 647 aa14.23□□□□□ -0.13
CHMP2A-201ENST00000312547 EMSYQ7Z589 1322 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 PP2D1A8MPX8 630 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 SGPL1O95470 568 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 PSAPP07602 524 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 TCF7P36402 384 aaPredicted RBP14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 ME1P48163 572 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 GJA8P48165 433 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 BEX3Q00994 111 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 DGKDQ16760 1214 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 BRDTQ58F21 947 aaPredicted RBP14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 GNASQ5JWF2 1037 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 RNF180Q86T96 592 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 CCDC60Q8IWA6 550 aaPredicted RBP14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 ARRDC4Q8NCT1 418 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 EIF2AK1Q9BQI3 630 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 C16orf70Q9BSU1 422 aa14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-201ENST00000312547 IGSF9BQ9UPX0 1349 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 KPNA6O60684 536 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 SLITRK3O94933 977 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 F2P00734 622 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 LGALS2P05162 132 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 SPATA31C1P0DKV0 1188 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 CDC25AP30304 524 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 PURAQ00577 322 aaKnown RBP14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 ADALQ6DHV7 355 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms