RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 MAATS1Q7Z4T9 603 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 LTBP3Q9NS15 1303 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 PALM3A6NDB9 673 aaPredicted RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 USO1O60763 962 aaKnown RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 PAFAH1B1P43034 410 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 CLNS1AP54105 237 aaKnown RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 C1QTNF8P60827 252 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 INF2Q27J81 1249 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 NAIF1Q69YI7 327 aaPredicted RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 CNNM4Q6P4Q7 775 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 FOXR2Q6PJQ5 311 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 IFT20Q8IY31 132 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 DHX37Q8IY37 1157 aaKnown RBP20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 RASGRP4Q8TDF6 673 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 ZMYND12Q9H0C1 365 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 PLAAQ9Y263 795 aa20.74■□□□□ 0.91
HERPUD2-201ENST00000311350 GOLGA6L7A0A1B0GV03 622 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 WTIPA6NIX2 430 aaPredicted RBP20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 PP2D1A8MPX8 630 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 LCA5LO95447 670 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 TCP1P17987 556 aaKnown RBP20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 MIIPQ5JXC2 388 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 EMC10Q5UCC4 262 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 TMC4Q7Z404 712 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 SPZ1Q9BXG8 430 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 PLCG1P19174 1290 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 MTMR8Q96EF0 704 aa20.73■□□□□ 0.91
HERPUD2-201ENST00000311350 SMARCA1P28370 1054 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 KIF11P52732 1056 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 PDE4DQ08499 809 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 ANKRD20A8PQ5CZ79 823 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 ANKRD40Q6AI12 368 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 LRRC15Q8TF66 581 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 RBM17Q96I25 401 aaKnown RBP20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 NOC4LQ9BVI4 516 aaKnown RBP20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 CCDC88AQ3V6T2 1871 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 SBF1O95248 1867 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 PRDX5P30044 214 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 MTIF2P46199 727 aaKnown RBP20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 BYSLQ13895 437 aaKnown RBP20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 ACCSLQ4AC99 568 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 KRT12Q99456 494 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 PLAGL2Q9UPG8 496 aa20.72■□□□□ 0.91
HERPUD2-201ENST00000311350 FGFR1OPO95684 399 aaKnown RBP20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 KLHDC7AQ5VTJ3 777 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 CENPPQ6IPU0 288 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 TLDC1Q6P9B6 456 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 PROCA1Q8NCQ7 364 aaPredicted RBP20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 SGSM3Q96HU1 749 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 CRAMP1Q96RY5 1269 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 LEMD3Q9Y2U8 911 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 CYTH3O43739 400 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 SF3A3Q12874 501 aaKnown RBP eCLIP20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 PAK2Q13177 524 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 CHADLQ6NUI6 762 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 CD302Q8IX05 232 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 EDEM3Q9BZQ6 932 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
HERPUD2-201ENST00000311350 GMNCA6NCL1 334 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 USP17L8P0C7I0 530 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 NONOQ15233 471 aaKnown RBP eCLIP20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 FAM207AQ9NSI2 230 aaPredicted RBP20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 FER1L6Q2WGJ9 1857 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 PVALEFA0A1B0GWK0 134 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 KIF3CO14782 793 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 PPP1R12AO14974 1030 aaPredicted RBP20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 RTN2O75298 545 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 GNA11P29992 359 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 SCTRP47872 440 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 PPP4CP60510 307 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 ASIC1P78348 528 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 CCDC155Q8N6L0 562 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 TBC1D31Q96DN5 1066 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 ALS2CR12Q96Q35 445 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 TMBIM4Q9HC24 238 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 STK17AQ9UEE5 414 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 GGA2Q9UJY4 613 aa20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 BAZ2BQ9UIF8 2168 aaKnown RBP20.7■□□□□ 0.9
HERPUD2-201ENST00000311350 HMGB1P1B2RPK0 211 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 KLRK1P26718 216 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 STK4Q13043 487 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 CRYMQ14894 314 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 PPP4R3AQ6IN85 833 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 DZIP1Q86YF9 867 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 SEC16BQ96JE7 1060 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 ACTR5Q9H9F9 607 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 C6orf50Q9HD87 102 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 BCCIPQ9P287 314 aaKnown RBP eCLIP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 PACSIN2Q9UNF0 486 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms