RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TOMM70O94826 608 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 IFNB1P01574 187 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ATICP31939 592 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 MMEL1Q495T6 779 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 FBXO38Q6PIJ6 1188 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 AKT1S1Q96B36 256 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 EPN1Q9Y6I3 576 aaPredicted RBP8.89□□□□□ -0.99
VPS41-202ENST00000310301 CEMIPQ8WUJ3 1361 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 SMTNP53814 917 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 C2orf54Q08AI8 447 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 ERO1BQ86YB8 467 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 TXLNGQ9NUQ3 528 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 CTNND1O60716 968 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 IGKV5-2P06315 115 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 ATF2P15336 505 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 HOXA10P31260 410 aaPredicted RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 SPP2Q13103 211 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 CUL4BQ13620 913 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 AMNQ9BXJ7 453 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 IFT122Q9HBG6 1241 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 EPB41L5Q9HCM4 733 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 PNMA6AP0CW24 399 aaPredicted RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 STAT2P52630 851 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 RNASELQ05823 741 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 JADE1Q6IE81 842 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 EXOC8Q8IYI6 725 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 ST13P4Q8IZP2 240 aaPredicted RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 CEP70Q8NHQ1 597 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 DRC3Q9H069 523 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 EIF3CLB5ME19 914 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 GCNT3O95395 438 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 TTC4O95801 387 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 GNAT1P11488 350 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 FCER1AP12319 257 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 IL1RL1Q01638 556 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 ADCY1Q08828 1119 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 USH1GQ495M9 461 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 NAA35Q5VZE5 725 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 NCAPH2Q6IBW4 605 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 TMTC3Q6ZXV5 915 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 CHAMP1Q96JM3 812 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 EIF3CQ99613 913 aaKnown RBP8.88□□□□□ -0.99
VPS41-202ENST00000310301 LRRC4BQ9NT99 713 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 ANGPTL2Q9UKU9 493 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 MED23Q9ULK4 1368 aa8.88□□□□□ -0.99
VPS41-202ENST00000310301 POC1B-GALNT4F8VUJ3 575 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 EXOC3O60645 756 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 MAEAQ7L5Y9 396 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 MB21D1Q8N884 522 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 INTUQ9ULD6 942 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 LOC102724159A0A0B4J2E5 919 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 EEF1DP29692 281 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 ADORA1P30542 326 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 EHHADHQ08426 723 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PWP2Q15269 919 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 EP400NLQ6ZTU2 488 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 SCYL1Q96KG9 808 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 RAB20Q9NX57 234 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 EXOC7Q9UPT5 735 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 GNA14O95837 355 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 STAT1P42224 750 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 MYCT1Q8N699 235 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 TDRD7Q8NHU6 1098 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 EIF2AQ9BY44 585 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 MRPL44Q9H9J2 332 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 CCDC151A5D8V7 595 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 CHUKO15111 745 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 HEXIM1O94992 359 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 DDR1Q08345 913 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 RASGRF1Q13972 1273 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 CASP8Q14790 479 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 OSBPL5Q9H0X9 879 aaPredicted RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 FEM1BQ9UK73 627 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PALD1Q9ULE6 856 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PTPN22Q9Y2R2 807 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 ASB14A6NK59 587 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 EEF1GP26641 437 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 CASP14P31944 242 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 KRT25Q7Z3Z0 450 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PPP2R3CQ969Q6 453 aa8.87□□□□□ -0.99
VPS41-202ENST00000310301 PPWD1Q96BP3 646 aaKnown RBP8.87□□□□□ -0.99
VPS41-202ENST00000310301 USP28Q96RU2 1077 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms