RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 MAML1Q92585 1016 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 KCNB2Q92953 911 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
GGA2-201ENST00000309859 DDX18Q9NVP1 670 aaKnown RBP11.75□□□□□ -0.53
GGA2-201ENST00000309859 C21orf2O43822 256 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 PLEKHA8P1O95397 391 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 RGS9BPQ6ZS82 235 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 ZNF444Q8N0Y2 327 aaPredicted RBP11.75□□□□□ -0.53
GGA2-201ENST00000309859 SNX29Q8TEQ0 813 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 GORASP1Q9BQQ3 440 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 TNKSO95271 1327 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 DCDC2CA8MYV0 355 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 GFPT2O94808 682 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 CACNA2D1P54289 1103 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 MIS18BP1Q6P0N0 1132 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 SYCE1Q8N0S2 351 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 ARHGAP24Q8N264 748 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 KIFAP3Q92845 792 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 P3H4Q92791 437 aa11.75□□□□□ -0.53
GGA2-201ENST00000309859 MMADHCQ9H3L0 296 aaPredicted RBP11.75□□□□□ -0.53
GGA2-201ENST00000309859 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 KCTD21Q4G0X4 260 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 TMOD2Q9NZR1 351 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 SHOX2O60902 331 aaPredicted RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 IFNB1P01574 187 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 KITP10721 976 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 SLC29A2Q14542 456 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 IFNL3Q8IZI9 196 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 MKNK1Q9BUB5 465 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 LRRN2O75325 713 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 KRT16P08779 473 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 GOLGA8HP0CJ92 632 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 ATP6V1B1P15313 513 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 AKAP4Q5JQC9 854 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 CREG2Q8IUH2 290 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 GLG1Q92896 1179 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 CCDC124Q96CT7 223 aaKnown RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 RABGAP1Q9Y3P9 1069 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 HNRNPRO43390 633 aaKnown RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 GAS8O95995 478 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 CA4P22748 312 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 EIF3BP55884 814 aaKnown RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 ZNF844Q08AG5 666 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 PTPAQ15257 358 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 ANKRD40Q6AI12 368 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 ARHGEF18Q6ZSZ5 1173 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 TSC22D4Q9Y3Q8 395 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 NPHP3-ACAD11A0A0J9YXS1 232 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 TMEM120BA0PK00 339 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 PLCG1P19174 1290 aa11.74□□□□□ -0.53
GGA2-201ENST00000309859 IFI35P80217 286 aaPredicted RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 TMA7Q9Y2S6 64 aaKnown RBP11.74□□□□□ -0.53
GGA2-201ENST00000309859 CYP2D7A0A087X1C5 515 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 SEMA3EO15041 775 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 DPYDQ12882 1025 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CDC37Q16543 378 aaPredicted RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CWF19L1Q69YN2 538 aaKnown RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 HSD3B7Q9H2F3 369 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 TMOD4Q9NZQ9 345 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 ARMCX3Q9UH62 379 aaPredicted RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 MAGEB6P1A0A0J9YX57 407 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 RASA4BC9J798 803 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 RASA4O43374 803 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 RASSF9O75901 435 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CALML3P27482 149 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 LMBRD2Q68DH5 695 aaPredicted RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 KLRC1P26715 233 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 EPHB1P54762 984 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 ROR2Q01974 943 aaKnown RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 CCDC152Q4G0S7 254 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 ERLEC1Q96DZ1 483 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CLMNQ96JQ2 1002 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 PACSIN1Q9BY11 444 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 XAB2Q9HCS7 855 aaKnown RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 NPHS2Q9NP85 383 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 CAPN9O14815 690 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 STRN3Q13033 797 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 KAZNQ674X7 775 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
GGA2-201ENST00000309859 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
GGA2-201ENST00000309859 LAMC1P11047 1609 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms