RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
PTPN2-201ENST00000309660 REEP2Q9BRK0 252 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 CETN3O15182 167 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 CLIC2O15247 247 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 GCNT3O95395 438 aa12.75□□□□□ -0.37
PTPN2-201ENST00000309660 DDX39AO00148 427 aaKnown RBP12.74□□□□□ -0.37
PTPN2-201ENST00000309660 TBCAO75347 108 aaKnown RBP12.74□□□□□ -0.37
PTPN2-201ENST00000309660 STAT2P52630 851 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 AP3B2Q13367 1082 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 EHD2Q9NZN4 543 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 A0A1W2PQJ5 194 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 ZBTB39O15060 712 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 MSH4O15457 936 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 MYBP10242 640 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 ACTN1P12814 892 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 FAM193AP78312 1265 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 CCDC181Q5TID7 509 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 FAM133AQ8N9E0 248 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
PTPN2-201ENST00000309660 EHHADHQ08426 723 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 PLS1Q14651 629 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
PTPN2-201ENST00000309660 SFMBT2Q5VUG0 894 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 NFRKBQ6P4R8 1299 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 MAEAQ7L5Y9 396 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 HDXQ7Z353 690 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 DNAAF5Q86Y56 855 aa12.74□□□□□ -0.37
PTPN2-201ENST00000309660 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
PTPN2-201ENST00000309660 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
PTPN2-201ENST00000309660 PLSCR1O15162 318 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 KIF20AO95235 890 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 ETNPPLQ8TBG4 499 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 FBXO28Q9NVF7 368 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 VPS18Q9P253 973 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
PTPN2-201ENST00000309660 EML1O00423 815 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
PTPN2-201ENST00000309660 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 KCNA1Q09470 495 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 KCNH2Q12809 1159 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 GPS2Q13227 327 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 COBLL1Q53SF7 1204 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 KIAA1755Q5JYT7 1200 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 BAP1Q92560 729 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 ALS2CR12Q96Q35 445 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
PTPN2-201ENST00000309660 ADAMTS1Q9UHI8 967 aa12.73□□□□□ -0.37
PTPN2-201ENST00000309660 H3BQF6 201 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 KSR1Q8IVT5 923 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
PTPN2-201ENST00000309660 KLHL30Q0D2K2 578 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 GIT2Q14161 759 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
PTPN2-201ENST00000309660 TMEM39BQ9GZU3 492 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
PTPN2-201ENST00000309660 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
PTPN2-201ENST00000309660 RPA1P27694 616 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
PTPN2-201ENST00000309660 CASP8Q14790 479 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 LENG9Q96B70 501 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 SALL4Q9UJQ4 1053 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
PTPN2-201ENST00000309660 OPLAHO14841 1288 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 SLC9A1P19634 815 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 SREBF1P36956 1147 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms