RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EYSQ5T1H1 3165 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 A0A0G2JLL6 359 aaPredicted RBP5.91□□□□□ -1.46
CKS1B-201ENST00000308987 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 SNAP23O00161 211 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 PDE8AO60658 829 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 SASH1O94885 1247 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 BMP7P18075 431 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 GNAI1P63096 354 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 FKBP1BP68106 108 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 LMOD3Q0VAK6 560 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 LDLRAD1Q5T700 205 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 CLEC17AQ6ZS10 378 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 CHD1LQ86WJ1 897 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 ITPRIPQ8IWB1 547 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 TSPYL6Q8N831 410 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 CCDC191Q8NCU4 936 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 TTLL11Q8NHH1 800 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 ABHD4Q8TB40 342 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 CBX8Q9HC52 389 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 IFT57Q9NWB7 429 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 NOB1Q9ULX3 412 aaKnown RBP5.91□□□□□ -1.46
CKS1B-201ENST00000308987 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 IRS2Q9Y4H2 1338 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 MED23Q9ULK4 1368 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 ARAP2Q8WZ64 1704 aa5.91□□□□□ -1.46
CKS1B-201ENST00000308987 PRUNE2Q8WUY3 3088 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 SERPINB4P48594 390 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CCT4P50991 539 aaKnown RBP5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CASP7P55210 303 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 FCGRTP55899 365 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 PPP2R3AQ06190 1150 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 PRKG1Q13976 671 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CCDC152Q4G0S7 254 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 G2E3Q7L622 706 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CERS5Q8N5B7 392 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 TMEM57Q8N5G2 664 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 TSR2Q969E8 191 aaKnown RBP5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CLMNQ96JQ2 1002 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 GBP4Q96PP9 640 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 API5Q9BZZ5 524 aaKnown RBP5.9□□□□□ -1.46
CKS1B-201ENST00000308987 FOXQ1Q9C009 403 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 NIF3L1Q9GZT8 377 aa5.9□□□□□ -1.46
CKS1B-201ENST00000308987 CWC25Q9NXE8 425 aaPredicted RBP5.9□□□□□ -1.46
CKS1B-201ENST00000308987 VCANP13611 3396 aa5.9□□□□□ -1.47
CKS1B-201ENST00000308987 EIF1AYO14602 144 aaKnown RBP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 ICMTO60725 284 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 VAMP4O75379 141 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 XRCC6P12956 609 aaKnown RBP eCLIP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 CWF19L2Q2TBE0 894 aaKnown RBP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 FBXO46Q6PJ61 603 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 UBE3DQ7Z6J8 389 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 CCDC74AQ96AQ1 378 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 CCDC120Q96HB5 630 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 PRDM5Q9NQX1 630 aaPredicted RBP5.89□□□□□ -1.47
CKS1B-201ENST00000308987 AKAP2Q9Y2D5 859 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 MAP3K2Q9Y2U5 619 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 MGAMO43451 1857 aa5.89□□□□□ -1.47
CKS1B-201ENST00000308987 AK9Q5TCS8 1911 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 ALPK3Q96L96 1907 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 MYH13Q9UKX3 1938 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 FKTNO75072 461 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 SYN1P17600 705 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PKN2Q16513 984 aaKnown RBP5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PPM1JQ5JR12 505 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 STRIP1Q5VSL9 837 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PHLDB3Q6NSJ2 640 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 OTOP1Q7RTM1 612 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 KIAA0825Q8IV33 1275 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 STK35Q8TDR2 534 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 ALPK1Q96QP1 1244 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 PTPN18Q99952 460 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 CSADQ9Y600 493 aa5.88□□□□□ -1.47
CKS1B-201ENST00000308987 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 CDC45O75419 566 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 CSF1RP07333 972 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 SRFP11831 508 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 RAC2P15153 192 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 NTF4P34130 210 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 HABP4Q5JVS0 413 aaKnown RBP5.87□□□□□ -1.47
CKS1B-201ENST00000308987 NBPF12Q5TAG4 269 aaPredicted RBP5.87□□□□□ -1.47
CKS1B-201ENST00000308987 KSR2Q6VAB6 950 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 UBE3BQ7Z3V4 1068 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 GGNQ86UU5 652 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 PRMT6Q96LA8 375 aaPredicted RBP5.87□□□□□ -1.47
CKS1B-201ENST00000308987 PLA2G12BQ9BX93 195 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 COA1Q9GZY4 146 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 DEFB129Q9H1M3 183 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms