RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LIFRP42702 1097 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 NT5C2P49902 561 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 TNFAIP2Q03169 654 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 RGS12O14924 1447 aa11.66□□□□□ -0.54
SYNPO2-201ENST00000307142 ATP2C2O75185 946 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 MAN1A1P33908 653 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 TTBK2Q6IQ55 1244 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 SCN4BQ8IWT1 228 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 ENAHQ8N8S7 591 aaPredicted RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 NSUN4Q96CB9 384 aaKnown RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 LRRN2O75325 713 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 KCNV1Q6PIU1 500 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 GTF3C2Q8WUA4 911 aaPredicted RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 TOPORSQ9NS56 1045 aaPredicted RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 PPP6R2O75170 966 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 IFNAR1P17181 557 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 PARD3BQ8TEW8 1205 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 KIAA1210Q9ULL0 1709 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 CIITAP33076 1130 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 LONRF2Q1L5Z9 754 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 KLHL7Q8IXQ5 586 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 AGBL3Q8NEM8 1001 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 CCDC110Q8TBZ0 833 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 TMEM260Q9NX78 707 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 NCOA3Q9Y6Q9 1424 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 DYNC1LI2O43237 492 aaPredicted RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 IFNB1P01574 187 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 ADKP55263 362 aaKnown RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 TSPY1Q01534 308 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 DPF3Q92784 378 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 DDX23Q9BUQ8 820 aaKnown RBP11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 ANAPC5Q9UJX4 755 aa11.65□□□□□ -0.54
SYNPO2-201ENST00000307142 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.55
SYNPO2-201ENST00000307142 KRT76Q01546 638 aa11.65□□□□□ -0.55
SYNPO2-201ENST00000307142 LPAR1Q92633 364 aa11.65□□□□□ -0.55
SYNPO2-201ENST00000307142 MTMR6Q9Y217 621 aa11.65□□□□□ -0.55
SYNPO2-201ENST00000307142 PFDN6O15212 129 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 GMNNO75496 209 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 BHMT2Q9H2M3 363 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 QRICH1Q2TAL8 776 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 TAOK1Q7L7X3 1001 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 GOLGA8SH3BPF8 625 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 ATP5DP30049 168 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 UBE2TQ9NPD8 197 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 CAPN15O75808 1086 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 YY1P25490 414 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 RNF219Q5W0B1 726 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 AFAP1L2Q8N4X5 818 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM151AQ8WW52 585 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 AIFM3Q96NN9 605 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 GRM4Q14833 912 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 RFX6Q8HWS3 928 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 PPP2R3CQ969Q6 453 aa11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 IPO11Q9UI26 975 aaKnown RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 V9GYY5 206 aaPredicted RBP11.64□□□□□ -0.55
SYNPO2-201ENST00000307142 GOLGA8FQ08AF8 430 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 GOLGA8DPQ0D2H9 430 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 MCPH1Q8NEM0 835 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 TUBB4AP04350 444 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 CTSHP09668 335 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 SFNP31947 248 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 PFKFB3Q16875 520 aaPredicted RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 AFG1LQ8WV93 481 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 TEX13BQ9BXU2 312 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 GBA2Q9HCG7 927 aaPredicted RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 TMEM131LA2VDJ0 1609 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 H7C0C1 242 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 BUB1O43683 1085 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 LDHAP00338 332 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ATP5OP48047 213 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ALCAMQ13740 583 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 YAF2Q8IY57 180 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 GCNT4Q9P109 453 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms